Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 AC073621.1-201ENST00000392730 636 ntBASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 AC087163.2-201ENST00000457299 853 ntBASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 RPS15P9-201ENST00000494093 319 ntBASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 AC005593.1-201ENST00000624894 515 ntBASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 AC132872.4-202ENST00000622924 2756 ntBASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 AC006277.1-201ENST00000624348 1610 ntBASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
PCDHGB3Q9Y5G1 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.71■□□□□ 0.1
PCDHGB3Q9Y5G1 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.71■□□□□ 0.1
PCDHGB3Q9Y5G1 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PCDHGB3Q9Y5G1 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
PCDHGB3Q9Y5G1 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
PCDHGB3Q9Y5G1 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
PCDHGB3Q9Y5G1 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
PCDHGB3Q9Y5G1 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
PCDHGB3Q9Y5G1 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PCDHGB3Q9Y5G1 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.71■□□□□ 0.1
PCDHGB3Q9Y5G1 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PCDHGB3Q9Y5G1 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 FLJ16779-201ENST00000612722 7638 ntBASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 AC129492.6-201ENST00000611383 1305 ntBASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 KRT18P13-201ENST00000400056 1290 ntBASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 ELK2BP-201ENST00000415014 1224 ntBASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 UNC93B6-202ENST00000528242 690 ntBASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 AC091167.2-201ENST00000579581 588 ntBASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PCDHGB3Q9Y5G1 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PCDHGB3Q9Y5G1 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGB3Q9Y5G1 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGB3Q9Y5G1 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHGB3Q9Y5G1 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms