Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 PP12613-201ENST00000424958 2230 ntBASIC16.49■□□□□ 0.23
NCKAP1Q9Y2A7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
NCKAP1Q9Y2A7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NCKAP1Q9Y2A7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
NCKAP1Q9Y2A7 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 RN7SL828P-201ENST00000607615 303 ntBASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 AL589739.1-201ENST00000607720 493 ntBASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 AC009118.2-201ENST00000613275 655 ntBASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1Q9Y2A7 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 AC015922.1-201ENST00000421102 1152 ntBASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 AC027307.3-201ENST00000594262 1100 ntBASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 AC022144.1-201ENST00000602255 1580 ntBASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCKAP1Q9Y2A7 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCKAP1Q9Y2A7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCKAP1Q9Y2A7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCKAP1Q9Y2A7 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms