Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 UGT1A2P-201ENST00000454886 866 ntBASIC21.23■□□□□ 0.99
PDZRN3Q9UPQ7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC21.23■□□□□ 0.99
PDZRN3Q9UPQ7 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC21.23■□□□□ 0.99
PDZRN3Q9UPQ7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC21.23■□□□□ 0.99
PDZRN3Q9UPQ7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PDZRN3Q9UPQ7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC21.23■□□□□ 0.99
PDZRN3Q9UPQ7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDZRN3Q9UPQ7 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDZRN3Q9UPQ7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PDZRN3Q9UPQ7 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC21.23■□□□□ 0.99
PDZRN3Q9UPQ7 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PDZRN3Q9UPQ7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PDZRN3Q9UPQ7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDZRN3Q9UPQ7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDZRN3Q9UPQ7 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC21.22■□□□□ 0.99
PDZRN3Q9UPQ7 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDZRN3Q9UPQ7 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC21.22■□□□□ 0.99
PDZRN3Q9UPQ7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PDZRN3Q9UPQ7 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PDZRN3Q9UPQ7 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDZRN3Q9UPQ7 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDZRN3Q9UPQ7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDZRN3Q9UPQ7 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PDZRN3Q9UPQ7 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDZRN3Q9UPQ7 RAC2-204ENST00000406508 893 ntTSL 5 BASIC21.22■□□□□ 0.99
PDZRN3Q9UPQ7 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC21.22■□□□□ 0.99
PDZRN3Q9UPQ7 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDZRN3Q9UPQ7 HLA-J-202ENST00000469281 1241 ntBASIC21.22■□□□□ 0.99
PDZRN3Q9UPQ7 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC21.22■□□□□ 0.99
PDZRN3Q9UPQ7 AC069120.2-201ENST00000524091 540 ntBASIC21.22■□□□□ 0.99
PDZRN3Q9UPQ7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC21.22■□□□□ 0.99
PDZRN3Q9UPQ7 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
PDZRN3Q9UPQ7 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC21.22■□□□□ 0.99
PDZRN3Q9UPQ7 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDZRN3Q9UPQ7 AL009183.1-201ENST00000603760 355 ntBASIC21.22■□□□□ 0.99
PDZRN3Q9UPQ7 CECR7-204ENST00000609932 568 ntTSL 2 BASIC21.22■□□□□ 0.99
PDZRN3Q9UPQ7 AC092364.2-201ENST00000596710 2692 ntBASIC21.22■□□□□ 0.99
PDZRN3Q9UPQ7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC21.22■□□□□ 0.99
PDZRN3Q9UPQ7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC21.22■□□□□ 0.99
PDZRN3Q9UPQ7 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDZRN3Q9UPQ7 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDZRN3Q9UPQ7 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDZRN3Q9UPQ7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDZRN3Q9UPQ7 AC008677.1-201ENST00000519230 1561 ntBASIC21.22■□□□□ 0.99
PDZRN3Q9UPQ7 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDZRN3Q9UPQ7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDZRN3Q9UPQ7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDZRN3Q9UPQ7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
PDZRN3Q9UPQ7 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDZRN3Q9UPQ7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PDZRN3Q9UPQ7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDZRN3Q9UPQ7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDZRN3Q9UPQ7 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDZRN3Q9UPQ7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
PDZRN3Q9UPQ7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PDZRN3Q9UPQ7 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PDZRN3Q9UPQ7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PDZRN3Q9UPQ7 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
PDZRN3Q9UPQ7 GRAP-202ENST00000395635 834 ntTSL 2 BASIC21.21■□□□□ 0.99
PDZRN3Q9UPQ7 HMGA1P7-201ENST00000406908 502 ntBASIC21.21■□□□□ 0.99
PDZRN3Q9UPQ7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDZRN3Q9UPQ7 IGHV3-42-201ENST00000520410 361 ntBASIC21.21■□□□□ 0.99
PDZRN3Q9UPQ7 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PDZRN3Q9UPQ7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDZRN3Q9UPQ7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
PDZRN3Q9UPQ7 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC21.21■□□□□ 0.99
PDZRN3Q9UPQ7 TUBB8P12-201ENST00000308911 1335 ntBASIC21.21■□□□□ 0.99
PDZRN3Q9UPQ7 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDZRN3Q9UPQ7 TUBB7P-202ENST00000428444 1305 ntBASIC21.21■□□□□ 0.99
PDZRN3Q9UPQ7 TUBB8P7-204ENST00000567960 1332 ntBASIC21.21■□□□□ 0.99
PDZRN3Q9UPQ7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC21.21■□□□□ 0.99
PDZRN3Q9UPQ7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PDZRN3Q9UPQ7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDZRN3Q9UPQ7 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDZRN3Q9UPQ7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
PDZRN3Q9UPQ7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDZRN3Q9UPQ7 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDZRN3Q9UPQ7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDZRN3Q9UPQ7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC21.21■□□□□ 0.99
PDZRN3Q9UPQ7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDZRN3Q9UPQ7 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDZRN3Q9UPQ7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC21.2■□□□□ 0.99
PDZRN3Q9UPQ7 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
PDZRN3Q9UPQ7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
PDZRN3Q9UPQ7 UXT-AS1-201ENST00000590504 1525 ntBASIC21.2■□□□□ 0.98
PDZRN3Q9UPQ7 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC21.2■□□□□ 0.98
PDZRN3Q9UPQ7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDZRN3Q9UPQ7 ALOX12P2-203ENST00000570921 1945 ntBASIC21.2■□□□□ 0.98
PDZRN3Q9UPQ7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
PDZRN3Q9UPQ7 LINC02199-201ENST00000506655 2702 ntBASIC21.2■□□□□ 0.98
PDZRN3Q9UPQ7 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PDZRN3Q9UPQ7 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDZRN3Q9UPQ7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC21.2■□□□□ 0.98
PDZRN3Q9UPQ7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
PDZRN3Q9UPQ7 CRB3P1-201ENST00000449338 276 ntBASIC21.2■□□□□ 0.98
PDZRN3Q9UPQ7 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
PDZRN3Q9UPQ7 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PDZRN3Q9UPQ7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC21.2■□□□□ 0.98
PDZRN3Q9UPQ7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC21.2■□□□□ 0.98
PDZRN3Q9UPQ7 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms