Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLCF1Q9UBD9 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.63□□□□□ -0.07
CLCF1Q9UBD9 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLCF1Q9UBD9 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.63□□□□□ -0.07
CLCF1Q9UBD9 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.63□□□□□ -0.07
CLCF1Q9UBD9 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.63□□□□□ -0.07
CLCF1Q9UBD9 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CLCF1Q9UBD9 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.63□□□□□ -0.07
CLCF1Q9UBD9 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.63□□□□□ -0.07
CLCF1Q9UBD9 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.63□□□□□ -0.07
CLCF1Q9UBD9 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.63□□□□□ -0.07
CLCF1Q9UBD9 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.63□□□□□ -0.07
CLCF1Q9UBD9 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.63□□□□□ -0.07
CLCF1Q9UBD9 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
CLCF1Q9UBD9 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
CLCF1Q9UBD9 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLCF1Q9UBD9 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.63□□□□□ -0.07
CLCF1Q9UBD9 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLCF1Q9UBD9 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CLCF1Q9UBD9 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLCF1Q9UBD9 AC078925.2-201ENST00000624013 1973 ntBASIC14.63□□□□□ -0.07
CLCF1Q9UBD9 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CLCF1Q9UBD9 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLCF1Q9UBD9 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CLCF1Q9UBD9 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLCF1Q9UBD9 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLCF1Q9UBD9 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLCF1Q9UBD9 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLCF1Q9UBD9 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.62□□□□□ -0.07
CLCF1Q9UBD9 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
CLCF1Q9UBD9 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CLCF1Q9UBD9 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.62□□□□□ -0.07
CLCF1Q9UBD9 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CLCF1Q9UBD9 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
CLCF1Q9UBD9 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLCF1Q9UBD9 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLCF1Q9UBD9 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLCF1Q9UBD9 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLCF1Q9UBD9 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CLCF1Q9UBD9 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLCF1Q9UBD9 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CLCF1Q9UBD9 BASP1P1-201ENST00000430708 665 ntBASIC14.62□□□□□ -0.07
CLCF1Q9UBD9 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.62□□□□□ -0.07
CLCF1Q9UBD9 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.62□□□□□ -0.07
CLCF1Q9UBD9 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.62□□□□□ -0.07
CLCF1Q9UBD9 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.62□□□□□ -0.07
CLCF1Q9UBD9 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.62□□□□□ -0.07
CLCF1Q9UBD9 RNA5SP421-201ENST00000516864 134 ntBASIC14.62□□□□□ -0.07
CLCF1Q9UBD9 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
CLCF1Q9UBD9 MIR3197-201ENST00000582241 73 ntBASIC14.62□□□□□ -0.07
CLCF1Q9UBD9 AC003101.2-201ENST00000612557 442 ntBASIC14.62□□□□□ -0.07
CLCF1Q9UBD9 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.62□□□□□ -0.07
CLCF1Q9UBD9 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.62□□□□□ -0.07
CLCF1Q9UBD9 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.62□□□□□ -0.07
CLCF1Q9UBD9 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLCF1Q9UBD9 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLCF1Q9UBD9 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLCF1Q9UBD9 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLCF1Q9UBD9 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 AL353705.2-201ENST00000428243 662 ntBASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 AC092580.3-201ENST00000430932 139 ntBASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 AC097493.3-201ENST00000509725 367 ntBASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 RNA5SP410-201ENST00000516285 106 ntBASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 IGHV3-42-201ENST00000520410 361 ntBASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 AC092364.2-202ENST00000597012 1073 ntBASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 AL390754.1-201ENST00000619088 582 ntBASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 AJ011932.1-201ENST00000621707 465 ntBASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 GGT3P-204ENST00000453783 1664 ntBASIC14.61□□□□□ -0.07
CLCF1Q9UBD9 HLA-A-202ENST00000376806 1854 ntBASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms