Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 AC126177.1-201ENST00000547829 2218 ntBASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE2Q9NRR3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 MIR648-201ENST00000385046 94 ntBASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 HCG4-201ENST00000418983 998 ntBASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 SLC25A6P2-201ENST00000497974 877 ntBASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 MTDHP4-201ENST00000600287 670 ntBASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms