Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
C12orf4Q9NQ89 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
C12orf4Q9NQ89 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
C12orf4Q9NQ89 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.46□□□□□ -0.09
C12orf4Q9NQ89 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
C12orf4Q9NQ89 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.46□□□□□ -0.1
C12orf4Q9NQ89 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
C12orf4Q9NQ89 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.46□□□□□ -0.1
C12orf4Q9NQ89 AC106881.1-201ENST00000605849 3329 ntBASIC14.46□□□□□ -0.1
C12orf4Q9NQ89 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.46□□□□□ -0.1
C12orf4Q9NQ89 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.46□□□□□ -0.1
C12orf4Q9NQ89 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
C12orf4Q9NQ89 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 KLF4P1-201ENST00000412782 1185 ntBASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 AC246785.2-201ENST00000432512 513 ntBASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 VENTXP7-201ENST00000475503 772 ntBASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 AC011498.5-201ENST00000592027 486 ntBASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C12orf4Q9NQ89 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 AL845331.1-201ENST00000424978 1190 ntBASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 AC022616.7-201ENST00000525383 220 ntBASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 AC009533.2-201ENST00000543664 586 ntBASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 FRMD8P1-201ENST00000440433 1524 ntBASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.44□□□□□ -0.1
C12orf4Q9NQ89 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
C12orf4Q9NQ89 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
C12orf4Q9NQ89 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
C12orf4Q9NQ89 TUBB8P12-201ENST00000308911 1335 ntBASIC14.43□□□□□ -0.1
C12orf4Q9NQ89 TUBB7P-202ENST00000428444 1305 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms