Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 AC091917.2-201ENST00000505002 744 ntBASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 WARS-232ENST00000556645 2508 ntTSL 5 BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP4Q9BWG4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP4Q9BWG4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP4Q9BWG4 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SSBP4Q9BWG4 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP4Q9BWG4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SSBP4Q9BWG4 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP4Q9BWG4 AC009336.1-201ENST00000608941 1553 ntBASIC12.53□□□□□ -0.4
SSBP4Q9BWG4 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC12.53□□□□□ -0.4
SSBP4Q9BWG4 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP4Q9BWG4 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC12.53□□□□□ -0.4
SSBP4Q9BWG4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP4Q9BWG4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP4Q9BWG4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP4Q9BWG4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC12.53□□□□□ -0.4
SSBP4Q9BWG4 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC12.53□□□□□ -0.4
SSBP4Q9BWG4 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC12.53□□□□□ -0.4
SSBP4Q9BWG4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC12.53□□□□□ -0.4
SSBP4Q9BWG4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP4Q9BWG4 AL353801.3-201ENST00000609898 542 ntBASIC12.53□□□□□ -0.4
SSBP4Q9BWG4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
SSBP4Q9BWG4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP4Q9BWG4 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP4Q9BWG4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP4Q9BWG4 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP4Q9BWG4 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP4Q9BWG4 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP4Q9BWG4 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SSBP4Q9BWG4 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP4Q9BWG4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SSBP4Q9BWG4 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.53□□□□□ -0.4
SSBP4Q9BWG4 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP4Q9BWG4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC12.53□□□□□ -0.4
SSBP4Q9BWG4 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP4Q9BWG4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC12.53□□□□□ -0.4
SSBP4Q9BWG4 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC12.53□□□□□ -0.4
SSBP4Q9BWG4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP4Q9BWG4 AC138035.3-201ENST00000622706 2791 ntBASIC12.52□□□□□ -0.4
SSBP4Q9BWG4 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.52□□□□□ -0.4
SSBP4Q9BWG4 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
SSBP4Q9BWG4 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SSBP4Q9BWG4 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.4
SSBP4Q9BWG4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SSBP4Q9BWG4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SSBP4Q9BWG4 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SSBP4Q9BWG4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SSBP4Q9BWG4 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SSBP4Q9BWG4 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
SSBP4Q9BWG4 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.52□□□□□ -0.4
SSBP4Q9BWG4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
SSBP4Q9BWG4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SSBP4Q9BWG4 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SSBP4Q9BWG4 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 HBZP1-201ENST00000354915 429 ntBASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms