Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 AC068137.2-201ENST00000605408 478 ntBASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 AL596442.2-201ENST00000610240 980 ntBASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
PCGF1Q9BSM1 TUBB8P12-201ENST00000308911 1335 ntBASIC13.9□□□□□ -0.19
PCGF1Q9BSM1 TUBB7P-202ENST00000428444 1305 ntBASIC13.9□□□□□ -0.19
PCGF1Q9BSM1 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.9□□□□□ -0.19
PCGF1Q9BSM1 TUBB8P7-204ENST00000567960 1332 ntBASIC13.9□□□□□ -0.19
PCGF1Q9BSM1 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 AC107918.2-201ENST00000530817 355 ntBASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 SNHG9-202ENST00000564014 471 ntBASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 AC132872.4-202ENST00000622924 2756 ntBASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 AC092053.1-201ENST00000605787 1936 ntBASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCGF1Q9BSM1 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 MKNK2P1-201ENST00000437526 628 ntBASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 AC091812.2-201ENST00000619081 385 ntBASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms