Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.67□□□□□ -0.22
S1PR3Q99500 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
S1PR3Q99500 AC008741.2-201ENST00000612792 3115 ntBASIC13.67□□□□□ -0.22
S1PR3Q99500 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
S1PR3Q99500 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.67□□□□□ -0.22
S1PR3Q99500 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
S1PR3Q99500 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
S1PR3Q99500 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
S1PR3Q99500 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.66□□□□□ -0.22
S1PR3Q99500 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.66□□□□□ -0.22
S1PR3Q99500 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
S1PR3Q99500 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
S1PR3Q99500 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.66□□□□□ -0.22
S1PR3Q99500 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
S1PR3Q99500 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
S1PR3Q99500 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.66□□□□□ -0.22
S1PR3Q99500 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
S1PR3Q99500 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
S1PR3Q99500 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
S1PR3Q99500 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.66□□□□□ -0.22
S1PR3Q99500 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
S1PR3Q99500 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
S1PR3Q99500 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.66□□□□□ -0.22
S1PR3Q99500 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
S1PR3Q99500 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
S1PR3Q99500 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
S1PR3Q99500 MRPL20P1-201ENST00000400819 433 ntBASIC13.66□□□□□ -0.22
S1PR3Q99500 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.66□□□□□ -0.22
S1PR3Q99500 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.66□□□□□ -0.22
S1PR3Q99500 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.66□□□□□ -0.22
S1PR3Q99500 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
S1PR3Q99500 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.66□□□□□ -0.22
S1PR3Q99500 AC092910.1-201ENST00000482027 1129 ntBASIC13.66□□□□□ -0.22
S1PR3Q99500 IGHV3-65-201ENST00000523210 341 ntBASIC13.66□□□□□ -0.22
S1PR3Q99500 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.66□□□□□ -0.22
S1PR3Q99500 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.66□□□□□ -0.22
S1PR3Q99500 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.66□□□□□ -0.22
S1PR3Q99500 AL049840.3-201ENST00000602669 611 ntBASIC13.66□□□□□ -0.22
S1PR3Q99500 MIR7706-201ENST00000613747 67 ntBASIC13.66□□□□□ -0.22
S1PR3Q99500 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.66□□□□□ -0.22
S1PR3Q99500 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
S1PR3Q99500 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
S1PR3Q99500 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
S1PR3Q99500 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
S1PR3Q99500 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
S1PR3Q99500 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
S1PR3Q99500 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
S1PR3Q99500 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
S1PR3Q99500 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.66□□□□□ -0.22
S1PR3Q99500 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
S1PR3Q99500 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
S1PR3Q99500 AP002414.3-201ENST00000589352 1468 ntBASIC13.66□□□□□ -0.22
S1PR3Q99500 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
S1PR3Q99500 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
S1PR3Q99500 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
S1PR3Q99500 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
S1PR3Q99500 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.66□□□□□ -0.22
S1PR3Q99500 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
S1PR3Q99500 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.66□□□□□ -0.22
S1PR3Q99500 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
S1PR3Q99500 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
S1PR3Q99500 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
S1PR3Q99500 HLA-A-201ENST00000376802 1334 ntBASIC13.65□□□□□ -0.22
S1PR3Q99500 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
S1PR3Q99500 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
S1PR3Q99500 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.65□□□□□ -0.22
S1PR3Q99500 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
S1PR3Q99500 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
S1PR3Q99500 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
S1PR3Q99500 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.65□□□□□ -0.22
S1PR3Q99500 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
S1PR3Q99500 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
S1PR3Q99500 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
S1PR3Q99500 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
S1PR3Q99500 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
S1PR3Q99500 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
S1PR3Q99500 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
S1PR3Q99500 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
S1PR3Q99500 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
S1PR3Q99500 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
S1PR3Q99500 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
S1PR3Q99500 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.65□□□□□ -0.22
S1PR3Q99500 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC13.65□□□□□ -0.22
S1PR3Q99500 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
S1PR3Q99500 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.65□□□□□ -0.22
S1PR3Q99500 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.65□□□□□ -0.22
S1PR3Q99500 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
S1PR3Q99500 FDX1P1-201ENST00000449115 551 ntBASIC13.65□□□□□ -0.22
S1PR3Q99500 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC13.65□□□□□ -0.22
S1PR3Q99500 RNA5SP419-201ENST00000515908 135 ntBASIC13.65□□□□□ -0.22
S1PR3Q99500 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.65□□□□□ -0.22
S1PR3Q99500 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.65□□□□□ -0.22
S1PR3Q99500 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.65□□□□□ -0.22
S1PR3Q99500 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.65□□□□□ -0.22
S1PR3Q99500 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
S1PR3Q99500 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.65□□□□□ -0.22
S1PR3Q99500 CYP2A7P1-201ENST00000595391 815 ntBASIC13.65□□□□□ -0.22
S1PR3Q99500 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.65□□□□□ -0.22
S1PR3Q99500 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
S1PR3Q99500 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms