Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 AC008494.3-201ENST00000606615 944 ntBASIC19.11■□□□□ 0.65
CDK5RAP2Q96SN8 AC099568.2-201ENST00000609194 695 ntBASIC19.11■□□□□ 0.65
CDK5RAP2Q96SN8 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC19.11■□□□□ 0.65
CDK5RAP2Q96SN8 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.11■□□□□ 0.65
CDK5RAP2Q96SN8 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK5RAP2Q96SN8 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CDK5RAP2Q96SN8 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK5RAP2Q96SN8 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.11■□□□□ 0.65
CDK5RAP2Q96SN8 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC19.11■□□□□ 0.65
CDK5RAP2Q96SN8 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK5RAP2Q96SN8 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CDK5RAP2Q96SN8 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK5RAP2Q96SN8 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
CDK5RAP2Q96SN8 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CDK5RAP2Q96SN8 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CDK5RAP2Q96SN8 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDK5RAP2Q96SN8 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.11■□□□□ 0.65
CDK5RAP2Q96SN8 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CDK5RAP2Q96SN8 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CDK5RAP2Q96SN8 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK5RAP2Q96SN8 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK5RAP2Q96SN8 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDK5RAP2Q96SN8 DFFBP1-201ENST00000433250 979 ntBASIC19.11■□□□□ 0.65
CDK5RAP2Q96SN8 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDK5RAP2Q96SN8 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC19.11■□□□□ 0.65
CDK5RAP2Q96SN8 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
CDK5RAP2Q96SN8 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDK5RAP2Q96SN8 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.11■□□□□ 0.65
CDK5RAP2Q96SN8 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.11■□□□□ 0.65
CDK5RAP2Q96SN8 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK5RAP2Q96SN8 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.11■□□□□ 0.65
CDK5RAP2Q96SN8 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.1■□□□□ 0.65
CDK5RAP2Q96SN8 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDK5RAP2Q96SN8 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
CDK5RAP2Q96SN8 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
CDK5RAP2Q96SN8 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CDK5RAP2Q96SN8 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDK5RAP2Q96SN8 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDK5RAP2Q96SN8 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC19.1■□□□□ 0.65
CDK5RAP2Q96SN8 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CDK5RAP2Q96SN8 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CDK5RAP2Q96SN8 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDK5RAP2Q96SN8 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC19.1■□□□□ 0.65
CDK5RAP2Q96SN8 GNAQP1-201ENST00000444815 1067 ntBASIC19.1■□□□□ 0.65
CDK5RAP2Q96SN8 GALT-202ENST00000450095 1280 ntTSL 2 BASIC19.1■□□□□ 0.65
CDK5RAP2Q96SN8 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CDK5RAP2Q96SN8 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC19.1■□□□□ 0.65
CDK5RAP2Q96SN8 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC19.1■□□□□ 0.65
CDK5RAP2Q96SN8 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDK5RAP2Q96SN8 AC074044.1-201ENST00000609673 707 ntBASIC19.1■□□□□ 0.65
CDK5RAP2Q96SN8 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDK5RAP2Q96SN8 AL158212.4-201ENST00000624062 1286 ntBASIC19.1■□□□□ 0.65
CDK5RAP2Q96SN8 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CDK5RAP2Q96SN8 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDK5RAP2Q96SN8 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDK5RAP2Q96SN8 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.1■□□□□ 0.65
CDK5RAP2Q96SN8 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDK5RAP2Q96SN8 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDK5RAP2Q96SN8 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDK5RAP2Q96SN8 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDK5RAP2Q96SN8 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDK5RAP2Q96SN8 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDK5RAP2Q96SN8 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDK5RAP2Q96SN8 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 AC093004.1-201ENST00000508850 424 ntBASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 TP53TG3HP-202ENST00000569755 579 ntBASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 AL691432.1-201ENST00000596308 1422 ntBASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms