Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 PTP4A1P2-201ENST00000546033 454 ntBASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 AC010328.2-201ENST00000597698 1111 ntBASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
TRIM43Q96BQ3 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
TRIM43Q96BQ3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.64■□□□□ 0.42
TRIM43Q96BQ3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRIM43Q96BQ3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.42
TRIM43Q96BQ3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 BRI3BPP1-201ENST00000594224 787 ntBASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
TRIM43Q96BQ3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TRIM43Q96BQ3 GPAA1P2-202ENST00000606848 1787 ntBASIC17.63■□□□□ 0.41
TRIM43Q96BQ3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM43Q96BQ3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM43Q96BQ3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM43Q96BQ3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TRIM43Q96BQ3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM43Q96BQ3 HCG11-201ENST00000411553 5696 ntBASIC17.63■□□□□ 0.41
TRIM43Q96BQ3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM43Q96BQ3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.63■□□□□ 0.41
TRIM43Q96BQ3 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM43Q96BQ3 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM43Q96BQ3 AGER-203ENST00000375065 665 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM43Q96BQ3 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM43Q96BQ3 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.63■□□□□ 0.41
TRIM43Q96BQ3 AC026954.1-201ENST00000429771 1293 ntBASIC17.63■□□□□ 0.41
TRIM43Q96BQ3 YBX1P6-201ENST00000442962 1002 ntBASIC17.63■□□□□ 0.41
TRIM43Q96BQ3 FTH1P14-201ENST00000482930 551 ntBASIC17.63■□□□□ 0.41
TRIM43Q96BQ3 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms