Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 AC026120.1-201ENST00000611536 926 ntBASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 AL513210.1-201ENST00000629608 234 ntBASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 RNF216P1-203ENST00000404404 2427 ntBASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SH3KBP1Q96B97 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
SH3KBP1Q96B97 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SH3KBP1Q96B97 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
SH3KBP1Q96B97 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SH3KBP1Q96B97 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
SH3KBP1Q96B97 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SH3KBP1Q96B97 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SH3KBP1Q96B97 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SH3KBP1Q96B97 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.36■□□□□ 0.21
SH3KBP1Q96B97 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SH3KBP1Q96B97 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
SH3KBP1Q96B97 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SH3KBP1Q96B97 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SH3KBP1Q96B97 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SH3KBP1Q96B97 RN7SL589P-201ENST00000481268 310 ntBASIC16.36■□□□□ 0.21
SH3KBP1Q96B97 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.36■□□□□ 0.21
SH3KBP1Q96B97 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.36■□□□□ 0.21
SH3KBP1Q96B97 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.36■□□□□ 0.21
SH3KBP1Q96B97 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.36■□□□□ 0.21
SH3KBP1Q96B97 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SH3KBP1Q96B97 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.36■□□□□ 0.21
SH3KBP1Q96B97 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.36■□□□□ 0.21
SH3KBP1Q96B97 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SH3KBP1Q96B97 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SH3KBP1Q96B97 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SH3KBP1Q96B97 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SH3KBP1Q96B97 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.36■□□□□ 0.21
SH3KBP1Q96B97 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SH3KBP1Q96B97 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SH3KBP1Q96B97 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SH3KBP1Q96B97 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SH3KBP1Q96B97 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SH3KBP1Q96B97 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SH3KBP1Q96B97 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SH3KBP1Q96B97 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SH3KBP1Q96B97 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SH3KBP1Q96B97 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.35■□□□□ 0.21
SH3KBP1Q96B97 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SH3KBP1Q96B97 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SH3KBP1Q96B97 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SH3KBP1Q96B97 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SH3KBP1Q96B97 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SH3KBP1Q96B97 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SH3KBP1Q96B97 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SH3KBP1Q96B97 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SH3KBP1Q96B97 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SH3KBP1Q96B97 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SH3KBP1Q96B97 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SH3KBP1Q96B97 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SH3KBP1Q96B97 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.35■□□□□ 0.21
SH3KBP1Q96B97 AL355306.1-201ENST00000415580 579 ntBASIC16.35■□□□□ 0.21
SH3KBP1Q96B97 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.35■□□□□ 0.21
SH3KBP1Q96B97 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SH3KBP1Q96B97 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.35■□□□□ 0.21
SH3KBP1Q96B97 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SH3KBP1Q96B97 METTL21AP1-201ENST00000438852 635 ntBASIC16.35■□□□□ 0.21
SH3KBP1Q96B97 SPDYE11-202ENST00000450699 704 ntBASIC16.35■□□□□ 0.21
SH3KBP1Q96B97 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SH3KBP1Q96B97 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SH3KBP1Q96B97 AC109635.5-201ENST00000533593 962 ntBASIC16.35■□□□□ 0.21
SH3KBP1Q96B97 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.35■□□□□ 0.21
SH3KBP1Q96B97 DUX4L17-201ENST00000557360 1267 ntBASIC16.35■□□□□ 0.21
SH3KBP1Q96B97 SPDYE9P-201ENST00000570642 692 ntBASIC16.35■□□□□ 0.21
SH3KBP1Q96B97 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SH3KBP1Q96B97 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.35■□□□□ 0.21
SH3KBP1Q96B97 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
SH3KBP1Q96B97 SPDYE10P-202ENST00000612005 668 ntBASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms