Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NCLNQ969V3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NCLNQ969V3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
NCLNQ969V3 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NCLNQ969V3 AL391256.1-201ENST00000443260 1855 ntBASIC16.1■□□□□ 0.17
NCLNQ969V3 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
NCLNQ969V3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.1■□□□□ 0.17
NCLNQ969V3 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.09■□□□□ 0.17
NCLNQ969V3 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
NCLNQ969V3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.09■□□□□ 0.17
NCLNQ969V3 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.09■□□□□ 0.17
NCLNQ969V3 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.09■□□□□ 0.17
NCLNQ969V3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.09■□□□□ 0.17
NCLNQ969V3 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.09■□□□□ 0.17
NCLNQ969V3 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCLNQ969V3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCLNQ969V3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
NCLNQ969V3 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCLNQ969V3 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCLNQ969V3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NCLNQ969V3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCLNQ969V3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCLNQ969V3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NCLNQ969V3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NCLNQ969V3 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.09■□□□□ 0.17
NCLNQ969V3 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.09■□□□□ 0.17
NCLNQ969V3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCLNQ969V3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCLNQ969V3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NCLNQ969V3 SLC25A1P1-201ENST00000528351 927 ntBASIC16.09■□□□□ 0.17
NCLNQ969V3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.09■□□□□ 0.17
NCLNQ969V3 AL353135.1-201ENST00000606729 504 ntBASIC16.09■□□□□ 0.17
NCLNQ969V3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NCLNQ969V3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.09■□□□□ 0.17
NCLNQ969V3 AC117500.6-201ENST00000624871 588 ntBASIC16.09■□□□□ 0.17
NCLNQ969V3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.09■□□□□ 0.17
NCLNQ969V3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
NCLNQ969V3 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.09■□□□□ 0.17
NCLNQ969V3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCLNQ969V3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
NCLNQ969V3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCLNQ969V3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCLNQ969V3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NCLNQ969V3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCLNQ969V3 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCLNQ969V3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NCLNQ969V3 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NCLNQ969V3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCLNQ969V3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.09■□□□□ 0.17
NCLNQ969V3 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCLNQ969V3 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCLNQ969V3 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
NCLNQ969V3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCLNQ969V3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.17
NCLNQ969V3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
NCLNQ969V3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.08■□□□□ 0.17
NCLNQ969V3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
NCLNQ969V3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
NCLNQ969V3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
NCLNQ969V3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
NCLNQ969V3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
NCLNQ969V3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCLNQ969V3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCLNQ969V3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCLNQ969V3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.08■□□□□ 0.16
NCLNQ969V3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NCLNQ969V3 AP000347.1-202ENST00000435868 847 ntBASIC16.08■□□□□ 0.16
NCLNQ969V3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.08■□□□□ 0.16
NCLNQ969V3 IGHV3-22-201ENST00000520721 359 ntBASIC16.08■□□□□ 0.16
NCLNQ969V3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.08■□□□□ 0.16
NCLNQ969V3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCLNQ969V3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.08■□□□□ 0.16
NCLNQ969V3 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.08■□□□□ 0.16
NCLNQ969V3 AC005593.1-201ENST00000624894 515 ntBASIC16.08■□□□□ 0.16
NCLNQ969V3 TUBB8P12-201ENST00000308911 1335 ntBASIC16.08■□□□□ 0.16
NCLNQ969V3 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.08■□□□□ 0.16
NCLNQ969V3 TUBB7P-202ENST00000428444 1305 ntBASIC16.08■□□□□ 0.16
NCLNQ969V3 TUBB8P7-204ENST00000567960 1332 ntBASIC16.08■□□□□ 0.16
NCLNQ969V3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NCLNQ969V3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
NCLNQ969V3 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCLNQ969V3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCLNQ969V3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NCLNQ969V3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NCLNQ969V3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCLNQ969V3 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NCLNQ969V3 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.08■□□□□ 0.16
NCLNQ969V3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NCLNQ969V3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCLNQ969V3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NCLNQ969V3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
NCLNQ969V3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.08■□□□□ 0.16
NCLNQ969V3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCLNQ969V3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCLNQ969V3 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCLNQ969V3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NCLNQ969V3 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCLNQ969V3 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NCLNQ969V3 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCLNQ969V3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms