Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
ATL1Q8WXF7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ATL1Q8WXF7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATL1Q8WXF7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
ATL1Q8WXF7 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.15■□□□□ 0.18
ATL1Q8WXF7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ATL1Q8WXF7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.15■□□□□ 0.18
ATL1Q8WXF7 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
ATL1Q8WXF7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
ATL1Q8WXF7 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
ATL1Q8WXF7 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
ATL1Q8WXF7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.14■□□□□ 0.18
ATL1Q8WXF7 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
ATL1Q8WXF7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 AC109635.5-201ENST00000533593 962 ntBASIC16.14■□□□□ 0.17
ATL1Q8WXF7 AC106730.1-201ENST00000566722 1090 ntBASIC16.14■□□□□ 0.17
ATL1Q8WXF7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 AC027601.4-201ENST00000611259 610 ntBASIC16.14■□□□□ 0.17
ATL1Q8WXF7 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 AC004877.2-201ENST00000623941 599 ntBASIC16.14■□□□□ 0.17
ATL1Q8WXF7 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 BCAR1-209ENST00000546196 1340 ntBASIC16.14■□□□□ 0.17
ATL1Q8WXF7 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATL1Q8WXF7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.13■□□□□ 0.17
ATL1Q8WXF7 AC007967.2-201ENST00000432613 625 ntBASIC16.13■□□□□ 0.17
ATL1Q8WXF7 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 FAM197Y3-203ENST00000618346 717 ntBASIC16.13■□□□□ 0.17
ATL1Q8WXF7 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms