Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAB3IL1Q8TBN0 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
RAB3IL1Q8TBN0 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB3IL1Q8TBN0 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.53■□□□□ 0.24
RAB3IL1Q8TBN0 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB3IL1Q8TBN0 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.53■□□□□ 0.24
RAB3IL1Q8TBN0 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB3IL1Q8TBN0 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
RAB3IL1Q8TBN0 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAB3IL1Q8TBN0 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAB3IL1Q8TBN0 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB3IL1Q8TBN0 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAB3IL1Q8TBN0 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAB3IL1Q8TBN0 SIGLEC16-201ENST00000599858 1437 ntBASIC16.53■□□□□ 0.24
RAB3IL1Q8TBN0 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAB3IL1Q8TBN0 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB3IL1Q8TBN0 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAB3IL1Q8TBN0 TOP3BP1-201ENST00000420768 1380 ntBASIC16.52■□□□□ 0.24
RAB3IL1Q8TBN0 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.52■□□□□ 0.24
RAB3IL1Q8TBN0 AC243591.1-201ENST00000452967 1364 ntBASIC16.52■□□□□ 0.24
RAB3IL1Q8TBN0 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB3IL1Q8TBN0 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB3IL1Q8TBN0 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB3IL1Q8TBN0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAB3IL1Q8TBN0 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB3IL1Q8TBN0 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.52■□□□□ 0.24
RAB3IL1Q8TBN0 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAB3IL1Q8TBN0 OR2I1P-209ENST00000641730 5365 ntBASIC16.52■□□□□ 0.24
RAB3IL1Q8TBN0 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAB3IL1Q8TBN0 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAB3IL1Q8TBN0 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.52■□□□□ 0.24
RAB3IL1Q8TBN0 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAB3IL1Q8TBN0 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.52■□□□□ 0.24
RAB3IL1Q8TBN0 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.52■□□□□ 0.24
RAB3IL1Q8TBN0 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAB3IL1Q8TBN0 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.52■□□□□ 0.24
RAB3IL1Q8TBN0 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.52■□□□□ 0.24
RAB3IL1Q8TBN0 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB3IL1Q8TBN0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB3IL1Q8TBN0 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.52■□□□□ 0.24
RAB3IL1Q8TBN0 LINC00982-205ENST00000420957 435 ntBASIC16.52■□□□□ 0.24
RAB3IL1Q8TBN0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.52■□□□□ 0.24
RAB3IL1Q8TBN0 KRT8P26-201ENST00000534154 1276 ntBASIC16.52■□□□□ 0.24
RAB3IL1Q8TBN0 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.52■□□□□ 0.24
RAB3IL1Q8TBN0 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.52■□□□□ 0.24
RAB3IL1Q8TBN0 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.52■□□□□ 0.24
RAB3IL1Q8TBN0 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAB3IL1Q8TBN0 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
RAB3IL1Q8TBN0 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.52■□□□□ 0.24
RAB3IL1Q8TBN0 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.24
RAB3IL1Q8TBN0 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
RAB3IL1Q8TBN0 TP73-AS1-210ENST00000637775 1455 ntBASIC16.52■□□□□ 0.23
RAB3IL1Q8TBN0 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.52■□□□□ 0.23
RAB3IL1Q8TBN0 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAB3IL1Q8TBN0 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.52■□□□□ 0.23
RAB3IL1Q8TBN0 AC004817.3-201ENST00000602957 2129 ntBASIC16.52■□□□□ 0.23
RAB3IL1Q8TBN0 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RAB3IL1Q8TBN0 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAB3IL1Q8TBN0 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.52■□□□□ 0.23
RAB3IL1Q8TBN0 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAB3IL1Q8TBN0 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAB3IL1Q8TBN0 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
RAB3IL1Q8TBN0 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC16.52■□□□□ 0.23
RAB3IL1Q8TBN0 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAB3IL1Q8TBN0 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAB3IL1Q8TBN0 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 AL136379.1-201ENST00000623471 2642 ntBASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 AC010491.1-201ENST00000563101 2797 ntBASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 AL512652.2-201ENST00000625156 1716 ntBASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 INTS4P1-201ENST00000438455 1935 ntBASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 AL671710.1-201ENST00000610245 2349 ntBASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 AL031731.1-201ENST00000642131 2094 ntBASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms