Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 AC010331.1-201ENST00000611423 582 ntBASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 IGHV3-41-201ENST00000613121 348 ntBASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 AC243591.1-201ENST00000452967 1364 ntBASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFWD2Q8NHY2 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 PCED1CP-201ENST00000419887 785 ntBASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 FAM86EP-206ENST00000510506 987 ntBASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 AC069224.1-201ENST00000566372 1715 ntBASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.35■□□□□ 0.21
RFWD2Q8NHY2 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFWD2Q8NHY2 PMPCAP1-201ENST00000508114 1576 ntBASIC16.34■□□□□ 0.21
RFWD2Q8NHY2 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFWD2Q8NHY2 AC016027.1-202ENST00000607927 1699 ntBASIC16.34■□□□□ 0.21
RFWD2Q8NHY2 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFWD2Q8NHY2 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFWD2Q8NHY2 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFWD2Q8NHY2 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFWD2Q8NHY2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms