Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC148Q8NFR7 CD82-202ENST00000342935 967 ntTSL 5 BASIC19■□□□□ 0.63
CCDC148Q8NFR7 KRT18P13-201ENST00000400056 1290 ntBASIC19■□□□□ 0.63
CCDC148Q8NFR7 TFAMP1-201ENST00000412727 736 ntBASIC19■□□□□ 0.63
CCDC148Q8NFR7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19■□□□□ 0.63
CCDC148Q8NFR7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19■□□□□ 0.63
CCDC148Q8NFR7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CCDC148Q8NFR7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19■□□□□ 0.63
CCDC148Q8NFR7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CCDC148Q8NFR7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC148Q8NFR7 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19■□□□□ 0.63
CCDC148Q8NFR7 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19■□□□□ 0.63
CCDC148Q8NFR7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19■□□□□ 0.63
CCDC148Q8NFR7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19■□□□□ 0.63
CCDC148Q8NFR7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC148Q8NFR7 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
CCDC148Q8NFR7 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19■□□□□ 0.63
CCDC148Q8NFR7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19■□□□□ 0.63
CCDC148Q8NFR7 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CCDC148Q8NFR7 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC148Q8NFR7 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC148Q8NFR7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC148Q8NFR7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CCDC148Q8NFR7 ALOX12P2-203ENST00000570921 1945 ntBASIC19■□□□□ 0.63
CCDC148Q8NFR7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CCDC148Q8NFR7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19■□□□□ 0.63
CCDC148Q8NFR7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19■□□□□ 0.63
CCDC148Q8NFR7 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC148Q8NFR7 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19■□□□□ 0.63
CCDC148Q8NFR7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CCDC148Q8NFR7 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 CEND1P1-201ENST00000451006 455 ntBASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 AC026120.1-201ENST00000611536 926 ntBASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 AC023511.2-201ENST00000618803 211 ntBASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC148Q8NFR7 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 SPDYE11-202ENST00000450699 704 ntBASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 AC112482.1-201ENST00000492080 688 ntBASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 SPDYE9P-201ENST00000570642 692 ntBASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 MIR4469-201ENST00000583919 79 ntBASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 SPDYE10P-202ENST00000612005 668 ntBASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 SPDYE8P-202ENST00000612377 668 ntBASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms