Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 GSN-206ENST00000394353 2311 ntTSL 2 BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 CICP4-201ENST00000447359 2812 ntBASIC12.38□□□□□ -0.43
NUP35Q8NFH5 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 PCDHA3-202ENST00000532566 4594 ntBASIC12.37□□□□□ -0.43
NUP35Q8NFH5 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 FAM220CP-201ENST00000395253 831 ntBASIC12.37□□□□□ -0.43
NUP35Q8NFH5 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 FAM201B-201ENST00000458407 597 ntBASIC12.37□□□□□ -0.43
NUP35Q8NFH5 ZNF444P1-201ENST00000559497 298 ntBASIC12.37□□□□□ -0.43
NUP35Q8NFH5 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 GPX4-207ENST00000589115 812 ntTSL 2 BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 AC104581.4-201ENST00000623126 3052 ntBASIC12.37□□□□□ -0.43
NUP35Q8NFH5 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 AC125634.1-201ENST00000438758 1403 ntBASIC12.37□□□□□ -0.43
NUP35Q8NFH5 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
NUP35Q8NFH5 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
NUP35Q8NFH5 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NUP35Q8NFH5 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NUP35Q8NFH5 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NUP35Q8NFH5 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NUP35Q8NFH5 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NUP35Q8NFH5 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
NUP35Q8NFH5 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NUP35Q8NFH5 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NUP35Q8NFH5 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NUP35Q8NFH5 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
NUP35Q8NFH5 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC12.36□□□□□ -0.43
NUP35Q8NFH5 SNX33P1-201ENST00000592116 1762 ntBASIC12.36□□□□□ -0.43
NUP35Q8NFH5 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NUP35Q8NFH5 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms