Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 AC098831.1-202ENST00000438821 336 ntBASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 AC079328.2-201ENST00000561241 3354 ntBASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LSMEM1Q8N8F7 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 MRPL3P1-201ENST00000400109 1033 ntBASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 VN2R19P-201ENST00000442399 1052 ntBASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 AC009947.1-201ENST00000444350 727 ntBASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 IGHV3-22-201ENST00000520721 359 ntBASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 UNC93B6-202ENST00000528242 690 ntBASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 AL031432.2-201ENST00000566714 459 ntBASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 AL928711.1-201ENST00000570165 459 ntBASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 AP001005.1-201ENST00000571755 1248 ntBASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 MIR4751-201ENST00000578027 74 ntBASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 AC021097.1-201ENST00000607902 574 ntBASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
LSMEM1Q8N8F7 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 AC132872.4-202ENST00000622924 2756 ntBASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 AL596087.1-201ENST00000400979 1969 ntBASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 AC006449.6-201ENST00000612330 2296 ntBASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms