Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ZNF440Q8IYI8 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ZNF440Q8IYI8 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.08■□□□□ 0.01
ZNF440Q8IYI8 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.08■□□□□ 0.01
ZNF440Q8IYI8 REXO1L8P-201ENST00000604378 1897 ntBASIC15.08■□□□□ 0.01
ZNF440Q8IYI8 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF440Q8IYI8 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF440Q8IYI8 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF440Q8IYI8 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF440Q8IYI8 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.08■□□□□ 0
ZNF440Q8IYI8 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
ZNF440Q8IYI8 AC092474.2-201ENST00000424288 719 ntBASIC15.08■□□□□ 0
ZNF440Q8IYI8 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.08■□□□□ 0
ZNF440Q8IYI8 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.08■□□□□ 0
ZNF440Q8IYI8 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.08■□□□□ 0
ZNF440Q8IYI8 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.08■□□□□ 0
ZNF440Q8IYI8 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.08■□□□□ 0
ZNF440Q8IYI8 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.08■□□□□ 0
ZNF440Q8IYI8 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.08■□□□□ 0
ZNF440Q8IYI8 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.08■□□□□ 0
ZNF440Q8IYI8 RNA5SP416-201ENST00000516838 111 ntBASIC15.08■□□□□ 0
ZNF440Q8IYI8 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.08■□□□□ 0
ZNF440Q8IYI8 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.08■□□□□ 0
ZNF440Q8IYI8 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.08■□□□□ 0
ZNF440Q8IYI8 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.08■□□□□ 0
ZNF440Q8IYI8 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF440Q8IYI8 KRT19P2-202ENST00000557173 1012 ntBASIC15.08■□□□□ 0
ZNF440Q8IYI8 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
ZNF440Q8IYI8 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.08■□□□□ 0
ZNF440Q8IYI8 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.08■□□□□ 0
ZNF440Q8IYI8 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF440Q8IYI8 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.08■□□□□ 0
ZNF440Q8IYI8 AL161645.1-201ENST00000622716 1255 ntBASIC15.08■□□□□ 0
ZNF440Q8IYI8 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.08■□□□□ 0
ZNF440Q8IYI8 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF440Q8IYI8 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.08■□□□□ 0
ZNF440Q8IYI8 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF440Q8IYI8 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.08■□□□□ 0
ZNF440Q8IYI8 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF440Q8IYI8 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.08■□□□□ 0
ZNF440Q8IYI8 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.08■□□□□ 0
ZNF440Q8IYI8 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.08■□□□□ 0
ZNF440Q8IYI8 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.08■□□□□ 0
ZNF440Q8IYI8 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.08■□□□□ 0
ZNF440Q8IYI8 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.08■□□□□ 0
ZNF440Q8IYI8 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF440Q8IYI8 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF440Q8IYI8 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
ZNF440Q8IYI8 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.08■□□□□ 0
ZNF440Q8IYI8 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF440Q8IYI8 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.08■□□□□ 0
ZNF440Q8IYI8 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF440Q8IYI8 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.08■□□□□ 0
ZNF440Q8IYI8 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.08■□□□□ 0
ZNF440Q8IYI8 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF440Q8IYI8 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.08■□□□□ 0
ZNF440Q8IYI8 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.08■□□□□ 0
ZNF440Q8IYI8 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF440Q8IYI8 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.07■□□□□ 0
ZNF440Q8IYI8 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.07■□□□□ 0
ZNF440Q8IYI8 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ZNF440Q8IYI8 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.07■□□□□ 0
ZNF440Q8IYI8 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ZNF440Q8IYI8 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.07■□□□□ 0
ZNF440Q8IYI8 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ZNF440Q8IYI8 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
ZNF440Q8IYI8 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ZNF440Q8IYI8 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ZNF440Q8IYI8 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.07■□□□□ 0
ZNF440Q8IYI8 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.07■□□□□ 0
ZNF440Q8IYI8 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.07■□□□□ 0
ZNF440Q8IYI8 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ZNF440Q8IYI8 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ZNF440Q8IYI8 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ZNF440Q8IYI8 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.07■□□□□ 0
ZNF440Q8IYI8 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.07■□□□□ 0
ZNF440Q8IYI8 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.07■□□□□ 0
ZNF440Q8IYI8 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.07■□□□□ 0
ZNF440Q8IYI8 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.07■□□□□ 0
ZNF440Q8IYI8 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.07■□□□□ 0
ZNF440Q8IYI8 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ZNF440Q8IYI8 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.07■□□□□ 0
ZNF440Q8IYI8 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
ZNF440Q8IYI8 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ZNF440Q8IYI8 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.07■□□□□ 0
ZNF440Q8IYI8 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.07■□□□□ 0
ZNF440Q8IYI8 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.07■□□□□ 0
ZNF440Q8IYI8 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.07■□□□□ 0
ZNF440Q8IYI8 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.07■□□□□ 0
ZNF440Q8IYI8 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ZNF440Q8IYI8 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
ZNF440Q8IYI8 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.07■□□□□ 0
ZNF440Q8IYI8 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
ZNF440Q8IYI8 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
ZNF440Q8IYI8 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
ZNF440Q8IYI8 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
ZNF440Q8IYI8 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ZNF440Q8IYI8 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
ZNF440Q8IYI8 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.07■□□□□ 0
ZNF440Q8IYI8 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms