Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 ECEL1P2-202ENST00000465689 757 ntBASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 AC034232.1-201ENST00000506026 1064 ntBASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 MIR4785-201ENST00000585005 73 ntBASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.53□□□□□ -0.08
LYSMD2Q8IV50 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LYSMD2Q8IV50 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.52□□□□□ -0.08
LYSMD2Q8IV50 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LYSMD2Q8IV50 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
LYSMD2Q8IV50 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
LYSMD2Q8IV50 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.52□□□□□ -0.08
LYSMD2Q8IV50 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.52□□□□□ -0.08
LYSMD2Q8IV50 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LYSMD2Q8IV50 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LYSMD2Q8IV50 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LYSMD2Q8IV50 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
LYSMD2Q8IV50 AC013726.1-201ENST00000563747 2285 ntBASIC14.52□□□□□ -0.08
LYSMD2Q8IV50 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LYSMD2Q8IV50 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LYSMD2Q8IV50 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LYSMD2Q8IV50 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.52□□□□□ -0.09
LYSMD2Q8IV50 ECEL1P3-201ENST00000427961 737 ntBASIC14.52□□□□□ -0.09
LYSMD2Q8IV50 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC14.52□□□□□ -0.09
LYSMD2Q8IV50 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.52□□□□□ -0.09
LYSMD2Q8IV50 IGHV3-52-201ENST00000519770 353 ntBASIC14.52□□□□□ -0.09
LYSMD2Q8IV50 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.52□□□□□ -0.09
LYSMD2Q8IV50 AC109462.3-201ENST00000573934 613 ntBASIC14.52□□□□□ -0.09
LYSMD2Q8IV50 AL136038.4-201ENST00000603606 1261 ntBASIC14.52□□□□□ -0.09
LYSMD2Q8IV50 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LYSMD2Q8IV50 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
LYSMD2Q8IV50 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LYSMD2Q8IV50 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LYSMD2Q8IV50 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LYSMD2Q8IV50 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LYSMD2Q8IV50 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
LYSMD2Q8IV50 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LYSMD2Q8IV50 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.52□□□□□ -0.09
LYSMD2Q8IV50 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LYSMD2Q8IV50 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
LYSMD2Q8IV50 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 RASA4DP-201ENST00000460726 1199 ntBASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.51□□□□□ -0.09
LYSMD2Q8IV50 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms