Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.34■□□□□ 0.53
TRIM50Q86XT4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
TRIM50Q86XT4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM50Q86XT4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.34■□□□□ 0.53
TRIM50Q86XT4 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM50Q86XT4 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.34■□□□□ 0.53
TRIM50Q86XT4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM50Q86XT4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.34■□□□□ 0.53
TRIM50Q86XT4 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
TRIM50Q86XT4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TRIM50Q86XT4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.34■□□□□ 0.53
TRIM50Q86XT4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
TRIM50Q86XT4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM50Q86XT4 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM50Q86XT4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.33■□□□□ 0.53
TRIM50Q86XT4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM50Q86XT4 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM50Q86XT4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.33■□□□□ 0.53
TRIM50Q86XT4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.33■□□□□ 0.53
TRIM50Q86XT4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM50Q86XT4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM50Q86XT4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM50Q86XT4 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.33■□□□□ 0.52
TRIM50Q86XT4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.33■□□□□ 0.52
TRIM50Q86XT4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.33■□□□□ 0.52
TRIM50Q86XT4 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.33■□□□□ 0.52
TRIM50Q86XT4 AC093724.1-201ENST00000448659 1027 ntBASIC18.33■□□□□ 0.52
TRIM50Q86XT4 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.33■□□□□ 0.52
TRIM50Q86XT4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.33■□□□□ 0.52
TRIM50Q86XT4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM50Q86XT4 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.33■□□□□ 0.52
TRIM50Q86XT4 SERBP1P5-201ENST00000510079 1181 ntBASIC18.33■□□□□ 0.52
TRIM50Q86XT4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.33■□□□□ 0.52
TRIM50Q86XT4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.33■□□□□ 0.52
TRIM50Q86XT4 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM50Q86XT4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM50Q86XT4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM50Q86XT4 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM50Q86XT4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.33■□□□□ 0.52
TRIM50Q86XT4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM50Q86XT4 UBALD1-205ENST00000590891 2641 ntBASIC18.33■□□□□ 0.52
TRIM50Q86XT4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM50Q86XT4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.33■□□□□ 0.52
TRIM50Q86XT4 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM50Q86XT4 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM50Q86XT4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 AC015922.1-201ENST00000421102 1152 ntBASIC18.32■□□□□ 0.52
TRIM50Q86XT4 FAM207CP-201ENST00000443486 507 ntBASIC18.32■□□□□ 0.52
TRIM50Q86XT4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.32■□□□□ 0.52
TRIM50Q86XT4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 HLA-V-204ENST00000476601 1289 ntBASIC18.32■□□□□ 0.52
TRIM50Q86XT4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.32■□□□□ 0.52
TRIM50Q86XT4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM50Q86XT4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM50Q86XT4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM50Q86XT4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM50Q86XT4 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM50Q86XT4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM50Q86XT4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM50Q86XT4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM50Q86XT4 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM50Q86XT4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM50Q86XT4 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIM50Q86XT4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms