Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC62Q6P9F0 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CCDC62Q6P9F0 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CCDC62Q6P9F0 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC62Q6P9F0 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC62Q6P9F0 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.47■□□□□ 0.55
CCDC62Q6P9F0 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.47■□□□□ 0.55
CCDC62Q6P9F0 SPTLC1P1-201ENST00000447199 261 ntBASIC18.47■□□□□ 0.55
CCDC62Q6P9F0 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.47■□□□□ 0.55
CCDC62Q6P9F0 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC62Q6P9F0 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.47■□□□□ 0.55
CCDC62Q6P9F0 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC62Q6P9F0 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.47■□□□□ 0.55
CCDC62Q6P9F0 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC62Q6P9F0 SPDYE22P-201ENST00000582158 798 ntBASIC18.47■□□□□ 0.55
CCDC62Q6P9F0 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CCDC62Q6P9F0 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC62Q6P9F0 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.47■□□□□ 0.55
CCDC62Q6P9F0 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CCDC62Q6P9F0 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC62Q6P9F0 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.47■□□□□ 0.55
CCDC62Q6P9F0 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC62Q6P9F0 GPAA1P2-202ENST00000606848 1787 ntBASIC18.47■□□□□ 0.55
CCDC62Q6P9F0 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC62Q6P9F0 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC62Q6P9F0 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
CCDC62Q6P9F0 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CCDC62Q6P9F0 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC62Q6P9F0 FER1L4-210ENST00000615531 5998 ntBASIC18.46■□□□□ 0.55
CCDC62Q6P9F0 AL645608.8-201ENST00000606034 2086 ntBASIC18.46■□□□□ 0.55
CCDC62Q6P9F0 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC62Q6P9F0 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC62Q6P9F0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC62Q6P9F0 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC62Q6P9F0 GGT4P-201ENST00000623672 1708 ntBASIC18.46■□□□□ 0.55
CCDC62Q6P9F0 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC62Q6P9F0 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC62Q6P9F0 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC62Q6P9F0 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CCDC62Q6P9F0 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CCDC62Q6P9F0 AL589702.1-201ENST00000641229 1509 ntBASIC18.46■□□□□ 0.55
CCDC62Q6P9F0 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC62Q6P9F0 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC62Q6P9F0 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CCDC62Q6P9F0 AL080243.2-201ENST00000418783 582 ntBASIC18.46■□□□□ 0.55
CCDC62Q6P9F0 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC62Q6P9F0 AP005018.1-201ENST00000525475 301 ntBASIC18.46■□□□□ 0.55
CCDC62Q6P9F0 AL079307.3-201ENST00000556114 283 ntBASIC18.46■□□□□ 0.55
CCDC62Q6P9F0 AC008738.7-201ENST00000609744 511 ntBASIC18.46■□□□□ 0.55
CCDC62Q6P9F0 AC012645.4-201ENST00000610691 1061 ntBASIC18.46■□□□□ 0.55
CCDC62Q6P9F0 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.46■□□□□ 0.55
CCDC62Q6P9F0 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC62Q6P9F0 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
CCDC62Q6P9F0 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC62Q6P9F0 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC62Q6P9F0 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC62Q6P9F0 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC62Q6P9F0 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC62Q6P9F0 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC62Q6P9F0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.46■□□□□ 0.55
CCDC62Q6P9F0 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CCDC62Q6P9F0 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC62Q6P9F0 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC62Q6P9F0 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.54
CCDC62Q6P9F0 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.54
CCDC62Q6P9F0 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC62Q6P9F0 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC62Q6P9F0 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC62Q6P9F0 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC62Q6P9F0 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC62Q6P9F0 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC62Q6P9F0 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CCDC62Q6P9F0 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC62Q6P9F0 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC62Q6P9F0 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC62Q6P9F0 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.45■□□□□ 0.54
CCDC62Q6P9F0 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC62Q6P9F0 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC62Q6P9F0 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC62Q6P9F0 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC62Q6P9F0 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC62Q6P9F0 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC62Q6P9F0 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CCDC62Q6P9F0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC62Q6P9F0 AL035252.4-201ENST00000624174 288 ntBASIC18.45■□□□□ 0.54
CCDC62Q6P9F0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC62Q6P9F0 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CCDC62Q6P9F0 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC62Q6P9F0 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC62Q6P9F0 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC62Q6P9F0 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CCDC62Q6P9F0 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CCDC62Q6P9F0 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC62Q6P9F0 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC62Q6P9F0 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC62Q6P9F0 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.44■□□□□ 0.54
CCDC62Q6P9F0 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC62Q6P9F0 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC62Q6P9F0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC62Q6P9F0 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms