Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 AC008608.2-201ENST00000606089 416 ntBASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 CR383656.2-201ENST00000548656 2254 ntBASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 AC107918.4-201ENST00000641966 3141 ntBASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 SPDYE21P-201ENST00000413323 827 ntBASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 SCARNA2-201ENST00000458748 420 ntBASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 REXO1L6P-202ENST00000619970 1078 ntBASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 AL691432.3-201ENST00000621860 400 ntBASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.03
TMEM53Q6P2H8 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
TMEM53Q6P2H8 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TMEM53Q6P2H8 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TMEM53Q6P2H8 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TMEM53Q6P2H8 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
TMEM53Q6P2H8 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.21■□□□□ 0.02
TMEM53Q6P2H8 AC079776.2-201ENST00000641154 1609 ntBASIC15.21■□□□□ 0.02
TMEM53Q6P2H8 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.21■□□□□ 0.02
TMEM53Q6P2H8 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
TMEM53Q6P2H8 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
TMEM53Q6P2H8 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TMEM53Q6P2H8 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.21■□□□□ 0.02
TMEM53Q6P2H8 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 SIGLEC16-201ENST00000599858 1437 ntBASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms