Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 AC017007.3-201ENST00000479865 435 ntBASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNFT1Q5M7Z0 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
RNFT1Q5M7Z0 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNFT1Q5M7Z0 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.77□□□□□ -0.04
RNFT1Q5M7Z0 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
RNFT1Q5M7Z0 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.77□□□□□ -0.04
RNFT1Q5M7Z0 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RNFT1Q5M7Z0 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
RNFT1Q5M7Z0 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNFT1Q5M7Z0 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNFT1Q5M7Z0 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNFT1Q5M7Z0 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNFT1Q5M7Z0 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNFT1Q5M7Z0 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNFT1Q5M7Z0 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNFT1Q5M7Z0 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNFT1Q5M7Z0 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNFT1Q5M7Z0 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
RNFT1Q5M7Z0 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNFT1Q5M7Z0 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNFT1Q5M7Z0 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
RNFT1Q5M7Z0 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RNFT1Q5M7Z0 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.77□□□□□ -0.05
RNFT1Q5M7Z0 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.77□□□□□ -0.05
RNFT1Q5M7Z0 PIN1P1-201ENST00000412108 996 ntBASIC14.77□□□□□ -0.05
RNFT1Q5M7Z0 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.77□□□□□ -0.05
RNFT1Q5M7Z0 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.77□□□□□ -0.05
RNFT1Q5M7Z0 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.77□□□□□ -0.05
RNFT1Q5M7Z0 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.77□□□□□ -0.05
RNFT1Q5M7Z0 SPDYE22P-201ENST00000582158 798 ntBASIC14.77□□□□□ -0.05
RNFT1Q5M7Z0 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
RNFT1Q5M7Z0 AL662799.1-202ENST00000614205 422 ntBASIC14.77□□□□□ -0.05
RNFT1Q5M7Z0 AC004840.1-201ENST00000636359 365 ntBASIC14.77□□□□□ -0.05
RNFT1Q5M7Z0 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNFT1Q5M7Z0 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.77□□□□□ -0.05
RNFT1Q5M7Z0 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNFT1Q5M7Z0 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
RNFT1Q5M7Z0 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNFT1Q5M7Z0 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
RNFT1Q5M7Z0 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
RNFT1Q5M7Z0 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNFT1Q5M7Z0 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.77□□□□□ -0.05
RNFT1Q5M7Z0 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNFT1Q5M7Z0 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNFT1Q5M7Z0 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.77□□□□□ -0.05
RNFT1Q5M7Z0 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RNFT1Q5M7Z0 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.76□□□□□ -0.05
RNFT1Q5M7Z0 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RNFT1Q5M7Z0 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.76□□□□□ -0.05
RNFT1Q5M7Z0 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.76□□□□□ -0.05
RNFT1Q5M7Z0 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.76□□□□□ -0.05
RNFT1Q5M7Z0 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.76□□□□□ -0.05
RNFT1Q5M7Z0 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
RNFT1Q5M7Z0 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNFT1Q5M7Z0 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNFT1Q5M7Z0 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNFT1Q5M7Z0 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RNFT1Q5M7Z0 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms