Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 AC136632.2-201ENST00000512891 861 ntBASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 C20orf181-201ENST00000623918 480 ntBASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHRFAM7AQ494W8 AL365209.1-201ENST00000624418 6473 ntBASIC14.52□□□□□ -0.08
CHRFAM7AQ494W8 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CHRFAM7AQ494W8 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.52□□□□□ -0.08
CHRFAM7AQ494W8 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHRFAM7AQ494W8 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.52□□□□□ -0.08
CHRFAM7AQ494W8 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHRFAM7AQ494W8 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHRFAM7AQ494W8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.52□□□□□ -0.08
CHRFAM7AQ494W8 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CHRFAM7AQ494W8 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CHRFAM7AQ494W8 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CHRFAM7AQ494W8 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHRFAM7AQ494W8 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHRFAM7AQ494W8 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.52□□□□□ -0.09
CHRFAM7AQ494W8 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHRFAM7AQ494W8 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.52□□□□□ -0.09
CHRFAM7AQ494W8 CRYGEP-201ENST00000412192 528 ntBASIC14.52□□□□□ -0.09
CHRFAM7AQ494W8 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.52□□□□□ -0.09
CHRFAM7AQ494W8 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.52□□□□□ -0.09
CHRFAM7AQ494W8 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CHRFAM7AQ494W8 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.52□□□□□ -0.09
CHRFAM7AQ494W8 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.52□□□□□ -0.09
CHRFAM7AQ494W8 AC109462.3-201ENST00000573934 613 ntBASIC14.52□□□□□ -0.09
CHRFAM7AQ494W8 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.52□□□□□ -0.09
CHRFAM7AQ494W8 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.52□□□□□ -0.09
CHRFAM7AQ494W8 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.52□□□□□ -0.09
CHRFAM7AQ494W8 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.52□□□□□ -0.09
CHRFAM7AQ494W8 AP000867.4-201ENST00000641616 219 ntBASIC14.52□□□□□ -0.09
CHRFAM7AQ494W8 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CHRFAM7AQ494W8 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.52□□□□□ -0.09
CHRFAM7AQ494W8 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.52□□□□□ -0.09
CHRFAM7AQ494W8 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHRFAM7AQ494W8 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHRFAM7AQ494W8 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHRFAM7AQ494W8 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHRFAM7AQ494W8 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHRFAM7AQ494W8 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CHRFAM7AQ494W8 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHRFAM7AQ494W8 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CHRFAM7AQ494W8 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.52□□□□□ -0.09
CHRFAM7AQ494W8 PCDHB17P-201ENST00000539533 2393 ntBASIC14.52□□□□□ -0.09
CHRFAM7AQ494W8 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHRFAM7AQ494W8 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHRFAM7AQ494W8 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.52□□□□□ -0.09
CHRFAM7AQ494W8 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHRFAM7AQ494W8 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CHRFAM7AQ494W8 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHRFAM7AQ494W8 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHRFAM7AQ494W8 EGFEM1P-202ENST00000431685 1563 ntBASIC14.51□□□□□ -0.09
CHRFAM7AQ494W8 AC010460.3-201ENST00000511359 1579 ntBASIC14.51□□□□□ -0.09
CHRFAM7AQ494W8 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHRFAM7AQ494W8 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHRFAM7AQ494W8 AL662844.4-201ENST00000606367 2838 ntBASIC14.51□□□□□ -0.09
CHRFAM7AQ494W8 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHRFAM7AQ494W8 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHRFAM7AQ494W8 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CHRFAM7AQ494W8 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CHRFAM7AQ494W8 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHRFAM7AQ494W8 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CHRFAM7AQ494W8 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CHRFAM7AQ494W8 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CHRFAM7AQ494W8 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHRFAM7AQ494W8 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.51□□□□□ -0.09
CHRFAM7AQ494W8 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHRFAM7AQ494W8 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.51□□□□□ -0.09
CHRFAM7AQ494W8 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CHRFAM7AQ494W8 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CHRFAM7AQ494W8 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.51□□□□□ -0.09
CHRFAM7AQ494W8 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.51□□□□□ -0.09
CHRFAM7AQ494W8 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.51□□□□□ -0.09
CHRFAM7AQ494W8 ALG1L5P-201ENST00000482043 771 ntBASIC14.51□□□□□ -0.09
CHRFAM7AQ494W8 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.51□□□□□ -0.09
CHRFAM7AQ494W8 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CHRFAM7AQ494W8 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms