Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IRX4P78413 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
IRX4P78413 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.24■□□□□ 0.35
IRX4P78413 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
IRX4P78413 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
IRX4P78413 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
IRX4P78413 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.24■□□□□ 0.35
IRX4P78413 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.24■□□□□ 0.35
IRX4P78413 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IRX4P78413 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
IRX4P78413 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.23■□□□□ 0.35
IRX4P78413 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IRX4P78413 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.23■□□□□ 0.35
IRX4P78413 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IRX4P78413 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.23■□□□□ 0.35
IRX4P78413 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IRX4P78413 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.23■□□□□ 0.35
IRX4P78413 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IRX4P78413 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.23■□□□□ 0.35
IRX4P78413 PTCHD3P3-201ENST00000403073 906 ntBASIC17.23■□□□□ 0.35
IRX4P78413 AC004461.1-201ENST00000412461 403 ntBASIC17.23■□□□□ 0.35
IRX4P78413 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IRX4P78413 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
IRX4P78413 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.23■□□□□ 0.35
IRX4P78413 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.23■□□□□ 0.35
IRX4P78413 OR7E47P-204ENST00000575924 449 ntBASIC17.23■□□□□ 0.35
IRX4P78413 AC138761.1-201ENST00000584393 385 ntBASIC17.23■□□□□ 0.35
IRX4P78413 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.23■□□□□ 0.35
IRX4P78413 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
IRX4P78413 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.23■□□□□ 0.35
IRX4P78413 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.23■□□□□ 0.35
IRX4P78413 AL513210.1-201ENST00000629608 234 ntBASIC17.23■□□□□ 0.35
IRX4P78413 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IRX4P78413 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
IRX4P78413 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IRX4P78413 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IRX4P78413 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
IRX4P78413 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IRX4P78413 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.23■□□□□ 0.35
IRX4P78413 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
IRX4P78413 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IRX4P78413 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IRX4P78413 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IRX4P78413 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.23■□□□□ 0.35
IRX4P78413 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IRX4P78413 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IRX4P78413 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.23■□□□□ 0.35
IRX4P78413 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.23■□□□□ 0.35
IRX4P78413 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IRX4P78413 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IRX4P78413 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
IRX4P78413 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
IRX4P78413 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IRX4P78413 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IRX4P78413 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
IRX4P78413 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IRX4P78413 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IRX4P78413 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IRX4P78413 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
IRX4P78413 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
IRX4P78413 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IRX4P78413 PAWRP1-201ENST00000451083 565 ntBASIC17.22■□□□□ 0.35
IRX4P78413 HLA-J-203ENST00000494367 1087 ntBASIC17.22■□□□□ 0.35
IRX4P78413 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.22■□□□□ 0.35
IRX4P78413 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.22■□□□□ 0.35
IRX4P78413 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.22■□□□□ 0.35
IRX4P78413 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
IRX4P78413 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.22■□□□□ 0.35
IRX4P78413 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.22■□□□□ 0.35
IRX4P78413 AC007064.4-201ENST00000637740 555 ntBASIC17.22■□□□□ 0.35
IRX4P78413 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IRX4P78413 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IRX4P78413 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IRX4P78413 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IRX4P78413 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
IRX4P78413 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
IRX4P78413 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IRX4P78413 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
IRX4P78413 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.22■□□□□ 0.35
IRX4P78413 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
IRX4P78413 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
IRX4P78413 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
IRX4P78413 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.21■□□□□ 0.35
IRX4P78413 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
IRX4P78413 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
IRX4P78413 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
IRX4P78413 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IRX4P78413 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
IRX4P78413 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
IRX4P78413 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
IRX4P78413 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
IRX4P78413 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IRX4P78413 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IRX4P78413 AC003669.1-201ENST00000334569 611 ntBASIC17.21■□□□□ 0.35
IRX4P78413 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
IRX4P78413 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
IRX4P78413 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
IRX4P78413 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.21■□□□□ 0.35
IRX4P78413 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.21■□□□□ 0.35
IRX4P78413 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms