Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 AC005412.3-201ENST00000580309 715 ntBASIC18.87■□□□□ 0.61
CHMP4BP1P59074 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CHMP4BP1P59074 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP4BP1P59074 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CHMP4BP1P59074 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP4BP1P59074 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP4BP1P59074 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.86■□□□□ 0.61
CHMP4BP1P59074 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
CHMP4BP1P59074 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP4BP1P59074 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP4BP1P59074 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.86■□□□□ 0.61
CHMP4BP1P59074 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP4BP1P59074 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CHMP4BP1P59074 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP4BP1P59074 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.86■□□□□ 0.61
CHMP4BP1P59074 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP4BP1P59074 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP4BP1P59074 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP4BP1P59074 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP4BP1P59074 CNN2P2-201ENST00000443536 909 ntBASIC18.86■□□□□ 0.61
CHMP4BP1P59074 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.86■□□□□ 0.61
CHMP4BP1P59074 CNN2P3-201ENST00000450201 906 ntBASIC18.86■□□□□ 0.61
CHMP4BP1P59074 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.86■□□□□ 0.61
CHMP4BP1P59074 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.86■□□□□ 0.61
CHMP4BP1P59074 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.86■□□□□ 0.61
CHMP4BP1P59074 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP4BP1P59074 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.86■□□□□ 0.61
CHMP4BP1P59074 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.86■□□□□ 0.61
CHMP4BP1P59074 AL136317.3-201ENST00000618497 906 ntBASIC18.86■□□□□ 0.61
CHMP4BP1P59074 AL161645.1-201ENST00000622716 1255 ntBASIC18.86■□□□□ 0.61
CHMP4BP1P59074 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.86■□□□□ 0.61
CHMP4BP1P59074 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.86■□□□□ 0.61
CHMP4BP1P59074 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP4BP1P59074 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP4BP1P59074 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP4BP1P59074 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.86■□□□□ 0.61
CHMP4BP1P59074 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP4BP1P59074 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
CHMP4BP1P59074 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.85■□□□□ 0.61
CHMP4BP1P59074 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
CHMP4BP1P59074 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CHMP4BP1P59074 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP4BP1P59074 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.85■□□□□ 0.61
CHMP4BP1P59074 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CHMP4BP1P59074 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP4BP1P59074 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP4BP1P59074 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CHMP4BP1P59074 MIR943-201ENST00000401286 94 ntBASIC18.85■□□□□ 0.61
CHMP4BP1P59074 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.85■□□□□ 0.61
CHMP4BP1P59074 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP4BP1P59074 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP4BP1P59074 SPCS2P4-201ENST00000436160 681 ntBASIC18.85■□□□□ 0.61
CHMP4BP1P59074 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP4BP1P59074 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP4BP1P59074 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.85■□□□□ 0.61
CHMP4BP1P59074 INGX-202ENST00000489074 768 ntBASIC18.85■□□□□ 0.61
CHMP4BP1P59074 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP4BP1P59074 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.85■□□□□ 0.61
CHMP4BP1P59074 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.85■□□□□ 0.61
CHMP4BP1P59074 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.85■□□□□ 0.61
CHMP4BP1P59074 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.85■□□□□ 0.61
CHMP4BP1P59074 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.85■□□□□ 0.61
CHMP4BP1P59074 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP4BP1P59074 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP4BP1P59074 AL390955.2-201ENST00000603032 514 ntBASIC18.85■□□□□ 0.61
CHMP4BP1P59074 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP4BP1P59074 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.85■□□□□ 0.61
CHMP4BP1P59074 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CHMP4BP1P59074 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms