Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RHBDL3P58872 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RHBDL3P58872 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RHBDL3P58872 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.3■□□□□ 0.68
RHBDL3P58872 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RHBDL3P58872 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC19.3■□□□□ 0.68
RHBDL3P58872 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RHBDL3P58872 DFFBP1-201ENST00000433250 979 ntBASIC19.3■□□□□ 0.68
RHBDL3P58872 AL589987.1-201ENST00000453380 819 ntBASIC19.3■□□□□ 0.68
RHBDL3P58872 POU5F1P6-201ENST00000466990 990 ntBASIC19.3■□□□□ 0.68
RHBDL3P58872 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RHBDL3P58872 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RHBDL3P58872 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC19.3■□□□□ 0.68
RHBDL3P58872 SDHAP3-202ENST00000515467 728 ntBASIC19.3■□□□□ 0.68
RHBDL3P58872 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC19.3■□□□□ 0.68
RHBDL3P58872 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC19.3■□□□□ 0.68
RHBDL3P58872 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC19.3■□□□□ 0.68
RHBDL3P58872 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RHBDL3P58872 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.3■□□□□ 0.68
RHBDL3P58872 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC19.3■□□□□ 0.68
RHBDL3P58872 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
RHBDL3P58872 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC19.3■□□□□ 0.68
RHBDL3P58872 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RHBDL3P58872 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RHBDL3P58872 SRD5A3P1-201ENST00000603021 949 ntBASIC19.3■□□□□ 0.68
RHBDL3P58872 CHCHD2P3-201ENST00000603038 451 ntBASIC19.3■□□□□ 0.68
RHBDL3P58872 AL109936.8-201ENST00000641772 604 ntBASIC19.3■□□□□ 0.68
RHBDL3P58872 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC19.3■□□□□ 0.68
RHBDL3P58872 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.3■□□□□ 0.68
RHBDL3P58872 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RHBDL3P58872 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RHBDL3P58872 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
RHBDL3P58872 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.3■□□□□ 0.68
RHBDL3P58872 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RHBDL3P58872 AL592424.1-201ENST00000563624 1536 ntBASIC19.3■□□□□ 0.68
RHBDL3P58872 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RHBDL3P58872 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.3■□□□□ 0.68
RHBDL3P58872 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RHBDL3P58872 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RHBDL3P58872 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RHBDL3P58872 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RHBDL3P58872 AC009053.2-201ENST00000563701 2365 ntBASIC19.29■□□□□ 0.68
RHBDL3P58872 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC19.29■□□□□ 0.68
RHBDL3P58872 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
RHBDL3P58872 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC19.29■□□□□ 0.68
RHBDL3P58872 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RHBDL3P58872 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RHBDL3P58872 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RHBDL3P58872 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RHBDL3P58872 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC19.29■□□□□ 0.68
RHBDL3P58872 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC19.29■□□□□ 0.68
RHBDL3P58872 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC19.29■□□□□ 0.68
RHBDL3P58872 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC19.29■□□□□ 0.68
RHBDL3P58872 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.29■□□□□ 0.68
RHBDL3P58872 MIR6069-201ENST00000620069 79 ntBASIC19.29■□□□□ 0.68
RHBDL3P58872 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RHBDL3P58872 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RHBDL3P58872 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RHBDL3P58872 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RHBDL3P58872 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RHBDL3P58872 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RHBDL3P58872 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RHBDL3P58872 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RHBDL3P58872 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RHBDL3P58872 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC19.29■□□□□ 0.68
RHBDL3P58872 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RHBDL3P58872 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.29■□□□□ 0.68
RHBDL3P58872 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.28■□□□□ 0.68
RHBDL3P58872 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.28■□□□□ 0.68
RHBDL3P58872 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RHBDL3P58872 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RHBDL3P58872 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
RHBDL3P58872 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RHBDL3P58872 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RHBDL3P58872 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
RHBDL3P58872 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RHBDL3P58872 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RHBDL3P58872 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RHBDL3P58872 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RHBDL3P58872 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RHBDL3P58872 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RHBDL3P58872 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RHBDL3P58872 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RHBDL3P58872 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RHBDL3P58872 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC19.28■□□□□ 0.68
RHBDL3P58872 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RHBDL3P58872 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RHBDL3P58872 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC19.28■□□□□ 0.68
RHBDL3P58872 PTK7-212ENST00000476760 902 ntTSL 2 BASIC19.28■□□□□ 0.68
RHBDL3P58872 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RHBDL3P58872 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC19.28■□□□□ 0.68
RHBDL3P58872 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC19.28■□□□□ 0.68
RHBDL3P58872 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC19.28■□□□□ 0.68
RHBDL3P58872 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RHBDL3P58872 AC140912.1-201ENST00000577171 1054 ntBASIC19.28■□□□□ 0.68
RHBDL3P58872 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC19.28■□□□□ 0.68
RHBDL3P58872 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC19.28■□□□□ 0.68
RHBDL3P58872 5S_rRNA.22-201ENST00000614916 106 ntBASIC19.28■□□□□ 0.68
RHBDL3P58872 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC19.28■□□□□ 0.68
RHBDL3P58872 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms