Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMIM11AP58511 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMIM11AP58511 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMIM11AP58511 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMIM11AP58511 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SMIM11AP58511 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMIM11AP58511 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMIM11AP58511 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMIM11AP58511 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMIM11AP58511 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.25■□□□□ 0.03
SMIM11AP58511 HCG4-201ENST00000418983 998 ntBASIC15.25■□□□□ 0.03
SMIM11AP58511 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.25■□□□□ 0.03
SMIM11AP58511 ATP5G2P1-201ENST00000433580 426 ntBASIC15.25■□□□□ 0.03
SMIM11AP58511 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.25■□□□□ 0.03
SMIM11AP58511 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.25■□□□□ 0.03
SMIM11AP58511 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.25■□□□□ 0.03
SMIM11AP58511 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.25■□□□□ 0.03
SMIM11AP58511 AC005412.3-201ENST00000580309 715 ntBASIC15.25■□□□□ 0.03
SMIM11AP58511 AC138894.3-201ENST00000603787 634 ntBASIC15.25■□□□□ 0.03
SMIM11AP58511 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
SMIM11AP58511 AC004706.3-202ENST00000621574 984 ntBASIC15.25■□□□□ 0.03
SMIM11AP58511 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMIM11AP58511 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMIM11AP58511 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMIM11AP58511 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SMIM11AP58511 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SMIM11AP58511 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
SMIM11AP58511 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMIM11AP58511 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.25■□□□□ 0.03
SMIM11AP58511 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
SMIM11AP58511 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.25■□□□□ 0.03
SMIM11AP58511 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMIM11AP58511 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.25■□□□□ 0.03
SMIM11AP58511 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.25■□□□□ 0.03
SMIM11AP58511 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMIM11AP58511 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SMIM11AP58511 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
SMIM11AP58511 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
SMIM11AP58511 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMIM11AP58511 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMIM11AP58511 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SMIM11AP58511 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM11AP58511 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM11AP58511 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM11AP58511 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM11AP58511 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM11AP58511 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM11AP58511 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM11AP58511 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SMIM11AP58511 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM11AP58511 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.24■□□□□ 0.03
SMIM11AP58511 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM11AP58511 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM11AP58511 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM11AP58511 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.24■□□□□ 0.03
SMIM11AP58511 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM11AP58511 PTCHD3P3-201ENST00000403073 906 ntBASIC15.24■□□□□ 0.03
SMIM11AP58511 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM11AP58511 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.24■□□□□ 0.03
SMIM11AP58511 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM11AP58511 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM11AP58511 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.24■□□□□ 0.03
SMIM11AP58511 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.24■□□□□ 0.03
SMIM11AP58511 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM11AP58511 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.24■□□□□ 0.03
SMIM11AP58511 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.24■□□□□ 0.03
SMIM11AP58511 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.24■□□□□ 0.03
SMIM11AP58511 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM11AP58511 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM11AP58511 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.24■□□□□ 0.03
SMIM11AP58511 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM11AP58511 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SMIM11AP58511 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
SMIM11AP58511 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM11AP58511 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM11AP58511 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.24■□□□□ 0.03
SMIM11AP58511 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM11AP58511 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM11AP58511 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM11AP58511 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM11AP58511 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM11AP58511 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SMIM11AP58511 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM11AP58511 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM11AP58511 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM11AP58511 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM11AP58511 AP005117.1-202ENST00000581724 1908 ntBASIC15.23■□□□□ 0.03
SMIM11AP58511 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM11AP58511 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.23■□□□□ 0.03
SMIM11AP58511 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.23■□□□□ 0.03
SMIM11AP58511 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.23■□□□□ 0.03
SMIM11AP58511 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM11AP58511 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM11AP58511 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.23■□□□□ 0.03
SMIM11AP58511 AC129492.6-201ENST00000611383 1305 ntBASIC15.23■□□□□ 0.03
SMIM11AP58511 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM11AP58511 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.23■□□□□ 0.03
SMIM11AP58511 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SMIM11AP58511 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM11AP58511 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms