Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.65■□□□□ 0.42
RAD23BP54727 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.65■□□□□ 0.42
RAD23BP54727 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RAD23BP54727 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAD23BP54727 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RAD23BP54727 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.65■□□□□ 0.42
RAD23BP54727 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAD23BP54727 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAD23BP54727 MST1L-201ENST00000442552 2185 ntBASIC17.64■□□□□ 0.42
RAD23BP54727 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RAD23BP54727 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.64■□□□□ 0.42
RAD23BP54727 WASH6P-202ENST00000359512 1437 ntBASIC17.64■□□□□ 0.42
RAD23BP54727 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.64■□□□□ 0.41
RAD23BP54727 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RAD23BP54727 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.64■□□□□ 0.41
RAD23BP54727 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.64■□□□□ 0.41
RAD23BP54727 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
RAD23BP54727 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RAD23BP54727 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAD23BP54727 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RAD23BP54727 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RAD23BP54727 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAD23BP54727 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAD23BP54727 AL355306.1-201ENST00000415580 579 ntBASIC17.64■□□□□ 0.41
RAD23BP54727 UPF3AP3-201ENST00000420996 769 ntBASIC17.64■□□□□ 0.41
RAD23BP54727 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.64■□□□□ 0.41
RAD23BP54727 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAD23BP54727 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.64■□□□□ 0.41
RAD23BP54727 AC092865.5-201ENST00000545435 363 ntBASIC17.64■□□□□ 0.41
RAD23BP54727 AC005829.1-201ENST00000570002 483 ntBASIC17.64■□□□□ 0.41
RAD23BP54727 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
RAD23BP54727 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAD23BP54727 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAD23BP54727 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.64■□□□□ 0.41
RAD23BP54727 AC020765.3-201ENST00000613051 740 ntBASIC17.64■□□□□ 0.41
RAD23BP54727 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RAD23BP54727 PCDHA1-201ENST00000378133 2726 ntBASIC17.64■□□□□ 0.41
RAD23BP54727 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.64■□□□□ 0.41
RAD23BP54727 PCGF3-213ENST00000620529 1899 ntBASIC17.64■□□□□ 0.41
RAD23BP54727 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAD23BP54727 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAD23BP54727 ME2P1-201ENST00000426028 1970 ntBASIC17.64■□□□□ 0.41
RAD23BP54727 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAD23BP54727 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAD23BP54727 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAD23BP54727 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAD23BP54727 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAD23BP54727 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.63■□□□□ 0.41
RAD23BP54727 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAD23BP54727 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAD23BP54727 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAD23BP54727 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAD23BP54727 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
RAD23BP54727 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAD23BP54727 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAD23BP54727 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.63■□□□□ 0.41
RAD23BP54727 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RAD23BP54727 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.63■□□□□ 0.41
RAD23BP54727 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAD23BP54727 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.63■□□□□ 0.41
RAD23BP54727 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAD23BP54727 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.63■□□□□ 0.41
RAD23BP54727 RARRES2P8-201ENST00000566335 367 ntBASIC17.63■□□□□ 0.41
RAD23BP54727 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.63■□□□□ 0.41
RAD23BP54727 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAD23BP54727 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAD23BP54727 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.63■□□□□ 0.41
RAD23BP54727 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
RAD23BP54727 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAD23BP54727 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RAD23BP54727 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RAD23BP54727 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.63■□□□□ 0.41
RAD23BP54727 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.63■□□□□ 0.41
RAD23BP54727 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.63■□□□□ 0.41
RAD23BP54727 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.63■□□□□ 0.41
RAD23BP54727 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAD23BP54727 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.63■□□□□ 0.41
RAD23BP54727 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAD23BP54727 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAD23BP54727 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAD23BP54727 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RAD23BP54727 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
RAD23BP54727 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RAD23BP54727 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAD23BP54727 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAD23BP54727 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAD23BP54727 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAD23BP54727 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.62■□□□□ 0.41
RAD23BP54727 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RAD23BP54727 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAD23BP54727 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAD23BP54727 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.62■□□□□ 0.41
RAD23BP54727 AL671277.1-201ENST00000429656 993 ntBASIC17.62■□□□□ 0.41
RAD23BP54727 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAD23BP54727 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RAD23BP54727 YBX1P5-201ENST00000509441 847 ntBASIC17.62■□□□□ 0.41
RAD23BP54727 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.62■□□□□ 0.41
RAD23BP54727 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.62■□□□□ 0.41
RAD23BP54727 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RAD23BP54727 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms