Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HCFC1P51610 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HCFC1P51610 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCFC1P51610 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.26□□□□□ -0.13
HCFC1P51610 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HCFC1P51610 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCFC1P51610 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.26□□□□□ -0.13
HCFC1P51610 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.26□□□□□ -0.13
HCFC1P51610 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCFC1P51610 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
HCFC1P51610 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.26□□□□□ -0.13
HCFC1P51610 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HCFC1P51610 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.26□□□□□ -0.13
HCFC1P51610 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCFC1P51610 KRT17P8-201ENST00000540749 863 ntBASIC14.26□□□□□ -0.13
HCFC1P51610 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.26□□□□□ -0.13
HCFC1P51610 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.26□□□□□ -0.13
HCFC1P51610 AL109936.8-201ENST00000641772 604 ntBASIC14.26□□□□□ -0.13
HCFC1P51610 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.26□□□□□ -0.13
HCFC1P51610 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCFC1P51610 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HCFC1P51610 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HCFC1P51610 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HCFC1P51610 AC011676.5-201ENST00000624864 2660 ntBASIC14.26□□□□□ -0.13
HCFC1P51610 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCFC1P51610 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCFC1P51610 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.26□□□□□ -0.13
HCFC1P51610 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HCFC1P51610 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCFC1P51610 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.26□□□□□ -0.13
HCFC1P51610 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCFC1P51610 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.26□□□□□ -0.13
HCFC1P51610 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
HCFC1P51610 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HCFC1P51610 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.26□□□□□ -0.13
HCFC1P51610 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.26□□□□□ -0.13
HCFC1P51610 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
HCFC1P51610 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCFC1P51610 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.25□□□□□ -0.13
HCFC1P51610 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCFC1P51610 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.25□□□□□ -0.13
HCFC1P51610 USP32P1-208ENST00000506594 1164 ntBASIC14.25□□□□□ -0.13
HCFC1P51610 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCFC1P51610 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HCFC1P51610 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HCFC1P51610 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.25□□□□□ -0.13
HCFC1P51610 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCFC1P51610 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
HCFC1P51610 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCFC1P51610 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.25□□□□□ -0.13
HCFC1P51610 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HCFC1P51610 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCFC1P51610 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.25□□□□□ -0.13
HCFC1P51610 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCFC1P51610 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCFC1P51610 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.25□□□□□ -0.13
HCFC1P51610 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCFC1P51610 AD000864.1-201ENST00000624076 2295 ntBASIC14.25□□□□□ -0.13
HCFC1P51610 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
HCFC1P51610 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HCFC1P51610 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCFC1P51610 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HCFC1P51610 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
HCFC1P51610 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCFC1P51610 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
HCFC1P51610 AC007541.1-201ENST00000570282 1469 ntBASIC14.25□□□□□ -0.13
HCFC1P51610 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCFC1P51610 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.25□□□□□ -0.13
HCFC1P51610 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
HCFC1P51610 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.25□□□□□ -0.13
HCFC1P51610 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.25□□□□□ -0.13
HCFC1P51610 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HCFC1P51610 RAB43P1-201ENST00000561790 589 ntBASIC14.25□□□□□ -0.13
HCFC1P51610 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.25□□□□□ -0.13
HCFC1P51610 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.25□□□□□ -0.13
HCFC1P51610 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.25□□□□□ -0.13
HCFC1P51610 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.25□□□□□ -0.13
HCFC1P51610 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.25□□□□□ -0.13
HCFC1P51610 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.25□□□□□ -0.13
HCFC1P51610 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.25□□□□□ -0.13
HCFC1P51610 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCFC1P51610 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
HCFC1P51610 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCFC1P51610 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
HCFC1P51610 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCFC1P51610 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
HCFC1P51610 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HCFC1P51610 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HCFC1P51610 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCFC1P51610 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HCFC1P51610 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.25□□□□□ -0.13
HCFC1P51610 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
HCFC1P51610 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HCFC1P51610 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
HCFC1P51610 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HCFC1P51610 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
HCFC1P51610 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.24□□□□□ -0.13
HCFC1P51610 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
HCFC1P51610 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.24□□□□□ -0.13
HCFC1P51610 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms