Protein–RNA interactions for Protein: P48163

ME1, NADP-dependent malic enzyme, humanhuman

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ME1P48163 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
ME1P48163 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
ME1P48163 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.93■□□□□ 0.62
ME1P48163 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ME1P48163 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.93■□□□□ 0.62
ME1P48163 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.93■□□□□ 0.62
ME1P48163 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
ME1P48163 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.93■□□□□ 0.62
ME1P48163 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.93■□□□□ 0.62
ME1P48163 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.93■□□□□ 0.62
ME1P48163 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.93■□□□□ 0.62
ME1P48163 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.93■□□□□ 0.62
ME1P48163 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.93■□□□□ 0.62
ME1P48163 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
ME1P48163 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ME1P48163 MIR1199-201ENST00000621445 119 ntBASIC18.93■□□□□ 0.62
ME1P48163 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.93■□□□□ 0.62
ME1P48163 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.93■□□□□ 0.62
ME1P48163 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
ME1P48163 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
ME1P48163 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ME1P48163 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.93■□□□□ 0.62
ME1P48163 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
ME1P48163 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ME1P48163 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ME1P48163 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ME1P48163 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ME1P48163 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.93■□□□□ 0.62
ME1P48163 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ME1P48163 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.93■□□□□ 0.62
ME1P48163 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.93■□□□□ 0.62
ME1P48163 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ME1P48163 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
ME1P48163 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.93■□□□□ 0.62
ME1P48163 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ME1P48163 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.92■□□□□ 0.62
ME1P48163 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ME1P48163 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.92■□□□□ 0.62
ME1P48163 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
ME1P48163 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.92■□□□□ 0.62
ME1P48163 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.92■□□□□ 0.62
ME1P48163 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.92■□□□□ 0.62
ME1P48163 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ME1P48163 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.92■□□□□ 0.62
ME1P48163 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
ME1P48163 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
ME1P48163 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ME1P48163 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
ME1P48163 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ME1P48163 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.92■□□□□ 0.62
ME1P48163 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ME1P48163 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ME1P48163 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.92■□□□□ 0.62
ME1P48163 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ME1P48163 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.92■□□□□ 0.62
ME1P48163 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.92■□□□□ 0.62
ME1P48163 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.92■□□□□ 0.62
ME1P48163 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.92■□□□□ 0.62
ME1P48163 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.92■□□□□ 0.62
ME1P48163 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ME1P48163 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.92■□□□□ 0.62
ME1P48163 AC008735.5-201ENST00000623544 497 ntBASIC18.92■□□□□ 0.62
ME1P48163 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ME1P48163 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ME1P48163 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.92■□□□□ 0.62
ME1P48163 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ME1P48163 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ME1P48163 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ME1P48163 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ME1P48163 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
ME1P48163 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ME1P48163 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ME1P48163 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ME1P48163 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.91■□□□□ 0.62
ME1P48163 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ME1P48163 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ME1P48163 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ME1P48163 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
ME1P48163 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.91■□□□□ 0.62
ME1P48163 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.91■□□□□ 0.62
ME1P48163 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.91■□□□□ 0.62
ME1P48163 IGHV3-65-201ENST00000523210 341 ntBASIC18.91■□□□□ 0.62
ME1P48163 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.91■□□□□ 0.62
ME1P48163 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ME1P48163 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ME1P48163 AL356488.2-201ENST00000602755 427 ntBASIC18.91■□□□□ 0.62
ME1P48163 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ME1P48163 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.91■□□□□ 0.62
ME1P48163 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ME1P48163 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.91■□□□□ 0.62
ME1P48163 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.91■□□□□ 0.62
ME1P48163 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ME1P48163 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.91■□□□□ 0.62
ME1P48163 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ME1P48163 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ME1P48163 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ME1P48163 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.91■□□□□ 0.62
ME1P48163 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
ME1P48163 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ME1P48163 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms