Protein–RNA interactions for Protein: P40616

ARL1, ADP-ribosylation factor-like protein 1, humanhuman

Predicted RBP Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARL1P40616 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.4■□□□□ 0.22
ARL1P40616 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.4■□□□□ 0.22
ARL1P40616 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ARL1P40616 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.4■□□□□ 0.22
ARL1P40616 TSPY19P-201ENST00000418461 509 ntBASIC16.4■□□□□ 0.22
ARL1P40616 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.4■□□□□ 0.22
ARL1P40616 TSPY18P-201ENST00000441642 509 ntBASIC16.4■□□□□ 0.22
ARL1P40616 FGFR3P6-201ENST00000457012 610 ntBASIC16.4■□□□□ 0.22
ARL1P40616 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.4■□□□□ 0.22
ARL1P40616 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.4■□□□□ 0.22
ARL1P40616 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.4■□□□□ 0.22
ARL1P40616 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.4■□□□□ 0.22
ARL1P40616 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ARL1P40616 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
ARL1P40616 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.4■□□□□ 0.22
ARL1P40616 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ARL1P40616 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARL1P40616 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.4■□□□□ 0.22
ARL1P40616 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.4■□□□□ 0.22
ARL1P40616 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARL1P40616 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
ARL1P40616 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.4■□□□□ 0.22
ARL1P40616 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARL1P40616 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ARL1P40616 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
ARL1P40616 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
ARL1P40616 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARL1P40616 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.39■□□□□ 0.21
ARL1P40616 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARL1P40616 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARL1P40616 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
ARL1P40616 HYMAI-201ENST00000635591 3347 ntBASIC16.39■□□□□ 0.21
ARL1P40616 AC005052.1-201ENST00000625181 2492 ntBASIC16.39■□□□□ 0.21
ARL1P40616 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARL1P40616 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.39■□□□□ 0.21
ARL1P40616 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARL1P40616 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARL1P40616 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARL1P40616 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
ARL1P40616 LINC00895-201ENST00000629028 1637 ntBASIC16.39■□□□□ 0.21
ARL1P40616 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARL1P40616 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARL1P40616 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.39■□□□□ 0.21
ARL1P40616 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARL1P40616 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.39■□□□□ 0.21
ARL1P40616 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
ARL1P40616 SAPCD2P3-201ENST00000455031 850 ntBASIC16.39■□□□□ 0.21
ARL1P40616 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
ARL1P40616 DUX4L17-201ENST00000557360 1267 ntBASIC16.39■□□□□ 0.21
ARL1P40616 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ARL1P40616 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.39■□□□□ 0.21
ARL1P40616 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.39■□□□□ 0.21
ARL1P40616 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
ARL1P40616 REXO1L6P-202ENST00000619970 1078 ntBASIC16.39■□□□□ 0.21
ARL1P40616 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.39■□□□□ 0.21
ARL1P40616 AC012313.10-201ENST00000623509 926 ntBASIC16.39■□□□□ 0.21
ARL1P40616 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARL1P40616 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.39■□□□□ 0.21
ARL1P40616 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
ARL1P40616 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ARL1P40616 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARL1P40616 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARL1P40616 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARL1P40616 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.39■□□□□ 0.21
ARL1P40616 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARL1P40616 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC16.38■□□□□ 0.21
ARL1P40616 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARL1P40616 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARL1P40616 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARL1P40616 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARL1P40616 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ARL1P40616 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARL1P40616 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
ARL1P40616 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARL1P40616 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ARL1P40616 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.38■□□□□ 0.21
ARL1P40616 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.38■□□□□ 0.21
ARL1P40616 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.38■□□□□ 0.21
ARL1P40616 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.38■□□□□ 0.21
ARL1P40616 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ARL1P40616 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.38■□□□□ 0.21
ARL1P40616 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.38■□□□□ 0.21
ARL1P40616 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.38■□□□□ 0.21
ARL1P40616 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.38■□□□□ 0.21
ARL1P40616 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARL1P40616 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
ARL1P40616 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARL1P40616 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARL1P40616 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ARL1P40616 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.38■□□□□ 0.21
ARL1P40616 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARL1P40616 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARL1P40616 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARL1P40616 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ARL1P40616 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARL1P40616 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.38■□□□□ 0.21
ARL1P40616 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
ARL1P40616 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARL1P40616 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARL1P40616 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms