Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 RN7SL618P-201ENST00000477850 296 ntBASIC18.78■□□□□ 0.6
COPB2P35606 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.78■□□□□ 0.6
COPB2P35606 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COPB2P35606 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.78■□□□□ 0.6
COPB2P35606 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COPB2P35606 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.78■□□□□ 0.6
COPB2P35606 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.78■□□□□ 0.6
COPB2P35606 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
COPB2P35606 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
COPB2P35606 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
COPB2P35606 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
COPB2P35606 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COPB2P35606 PCDHB17P-201ENST00000539533 2393 ntBASIC18.78■□□□□ 0.6
COPB2P35606 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COPB2P35606 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.78■□□□□ 0.6
COPB2P35606 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COPB2P35606 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
COPB2P35606 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
COPB2P35606 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
COPB2P35606 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
COPB2P35606 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COPB2P35606 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.77■□□□□ 0.6
COPB2P35606 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
COPB2P35606 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COPB2P35606 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
COPB2P35606 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
COPB2P35606 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COPB2P35606 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COPB2P35606 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COPB2P35606 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.77■□□□□ 0.6
COPB2P35606 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COPB2P35606 AP001094.4-201ENST00000579008 2176 ntBASIC18.77■□□□□ 0.6
COPB2P35606 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COPB2P35606 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COPB2P35606 GK-202ENST00000378941 458 ntTSL 3 BASIC18.77■□□□□ 0.6
COPB2P35606 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COPB2P35606 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COPB2P35606 NME2P1-201ENST00000426182 414 ntBASIC18.77■□□□□ 0.6
COPB2P35606 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.77■□□□□ 0.6
COPB2P35606 AL353779.1-201ENST00000434793 351 ntBASIC18.77■□□□□ 0.6
COPB2P35606 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COPB2P35606 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COPB2P35606 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
COPB2P35606 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.77■□□□□ 0.6
COPB2P35606 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.77■□□□□ 0.6
COPB2P35606 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
COPB2P35606 AC092068.3-201ENST00000587894 2016 ntBASIC18.77■□□□□ 0.6
COPB2P35606 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
COPB2P35606 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COPB2P35606 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COPB2P35606 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COPB2P35606 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.77■□□□□ 0.6
COPB2P35606 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
COPB2P35606 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
COPB2P35606 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.77■□□□□ 0.59
COPB2P35606 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.77■□□□□ 0.59
COPB2P35606 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.77■□□□□ 0.59
COPB2P35606 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
COPB2P35606 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
COPB2P35606 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.76■□□□□ 0.59
COPB2P35606 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COPB2P35606 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COPB2P35606 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COPB2P35606 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.76■□□□□ 0.59
COPB2P35606 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COPB2P35606 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.76■□□□□ 0.59
COPB2P35606 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COPB2P35606 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
COPB2P35606 AL589702.1-201ENST00000641229 1509 ntBASIC18.76■□□□□ 0.59
COPB2P35606 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
COPB2P35606 AL023806.1-201ENST00000603994 1649 ntBASIC18.76■□□□□ 0.59
COPB2P35606 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.76■□□□□ 0.59
COPB2P35606 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.76■□□□□ 0.59
COPB2P35606 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.76■□□□□ 0.59
COPB2P35606 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.76■□□□□ 0.59
COPB2P35606 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COPB2P35606 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
COPB2P35606 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
COPB2P35606 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
COPB2P35606 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.76■□□□□ 0.59
COPB2P35606 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
COPB2P35606 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.76■□□□□ 0.59
COPB2P35606 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COPB2P35606 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COPB2P35606 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.76■□□□□ 0.59
COPB2P35606 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
COPB2P35606 CU639417.3-201ENST00000624240 1404 ntBASIC18.75■□□□□ 0.59
COPB2P35606 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
COPB2P35606 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.75■□□□□ 0.59
COPB2P35606 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COPB2P35606 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
COPB2P35606 AL512652.2-201ENST00000625156 1716 ntBASIC18.75■□□□□ 0.59
COPB2P35606 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COPB2P35606 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
COPB2P35606 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COPB2P35606 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
COPB2P35606 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COPB2P35606 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.75■□□□□ 0.59
COPB2P35606 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.75■□□□□ 0.59
COPB2P35606 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms