Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.54□□□□□ -0.08
THBS4P35443 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
THBS4P35443 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
THBS4P35443 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
THBS4P35443 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
THBS4P35443 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
THBS4P35443 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
THBS4P35443 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
THBS4P35443 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
THBS4P35443 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.54□□□□□ -0.08
THBS4P35443 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.54□□□□□ -0.08
THBS4P35443 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
THBS4P35443 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.54□□□□□ -0.08
THBS4P35443 ALG1L5P-201ENST00000482043 771 ntBASIC14.54□□□□□ -0.08
THBS4P35443 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.54□□□□□ -0.08
THBS4P35443 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.54□□□□□ -0.08
THBS4P35443 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
THBS4P35443 AC005412.3-201ENST00000580309 715 ntBASIC14.54□□□□□ -0.08
THBS4P35443 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.54□□□□□ -0.08
THBS4P35443 AL691403.2-201ENST00000618460 490 ntBASIC14.54□□□□□ -0.08
THBS4P35443 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
THBS4P35443 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
THBS4P35443 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
THBS4P35443 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
THBS4P35443 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.54□□□□□ -0.08
THBS4P35443 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
THBS4P35443 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
THBS4P35443 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.54□□□□□ -0.08
THBS4P35443 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
THBS4P35443 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
THBS4P35443 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.54□□□□□ -0.08
THBS4P35443 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
THBS4P35443 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
THBS4P35443 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
THBS4P35443 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
THBS4P35443 LINC02199-201ENST00000506655 2702 ntBASIC14.54□□□□□ -0.08
THBS4P35443 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
THBS4P35443 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
THBS4P35443 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
THBS4P35443 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.54□□□□□ -0.08
THBS4P35443 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS4P35443 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS4P35443 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS4P35443 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
THBS4P35443 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
THBS4P35443 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.53□□□□□ -0.08
THBS4P35443 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
THBS4P35443 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
THBS4P35443 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
THBS4P35443 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.53□□□□□ -0.08
THBS4P35443 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS4P35443 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.53□□□□□ -0.08
THBS4P35443 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS4P35443 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.53□□□□□ -0.08
THBS4P35443 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.53□□□□□ -0.08
THBS4P35443 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS4P35443 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.53□□□□□ -0.08
THBS4P35443 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
THBS4P35443 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS4P35443 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.53□□□□□ -0.08
THBS4P35443 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS4P35443 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS4P35443 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS4P35443 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
THBS4P35443 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS4P35443 HTR5BP-201ENST00000430851 1154 ntBASIC14.53□□□□□ -0.08
THBS4P35443 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.53□□□□□ -0.08
THBS4P35443 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
THBS4P35443 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.53□□□□□ -0.08
THBS4P35443 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.53□□□□□ -0.08
THBS4P35443 AL645728.2-201ENST00000641974 660 ntBASIC14.53□□□□□ -0.08
THBS4P35443 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS4P35443 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.53□□□□□ -0.08
THBS4P35443 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
THBS4P35443 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS4P35443 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.53□□□□□ -0.08
THBS4P35443 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS4P35443 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS4P35443 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS4P35443 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
THBS4P35443 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS4P35443 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS4P35443 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.53□□□□□ -0.08
THBS4P35443 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS4P35443 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.52□□□□□ -0.08
THBS4P35443 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
THBS4P35443 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
THBS4P35443 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
THBS4P35443 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
THBS4P35443 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
THBS4P35443 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
THBS4P35443 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
THBS4P35443 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.08
THBS4P35443 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.52□□□□□ -0.08
THBS4P35443 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
THBS4P35443 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
THBS4P35443 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
THBS4P35443 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
THBS4P35443 MTHFR-217ENST00000641820 1569 ntBASIC14.52□□□□□ -0.08
THBS4P35443 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms