Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.73■□□□□ 0.27
RPA3P35244 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RPA3P35244 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPA3P35244 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPA3P35244 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPA3P35244 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RPA3P35244 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RPA3P35244 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RPA3P35244 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.72■□□□□ 0.27
RPA3P35244 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RPA3P35244 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPA3P35244 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPA3P35244 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RPA3P35244 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RPA3P35244 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RPA3P35244 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPA3P35244 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPA3P35244 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
RPA3P35244 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPA3P35244 LINC00982-205ENST00000420957 435 ntBASIC16.72■□□□□ 0.27
RPA3P35244 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RPA3P35244 AL160237.2-201ENST00000556165 472 ntBASIC16.72■□□□□ 0.27
RPA3P35244 AC139887.3-201ENST00000568585 713 ntBASIC16.72■□□□□ 0.27
RPA3P35244 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.72■□□□□ 0.27
RPA3P35244 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.72■□□□□ 0.27
RPA3P35244 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.72■□□□□ 0.27
RPA3P35244 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.72■□□□□ 0.27
RPA3P35244 AC025062.2-201ENST00000605477 670 ntBASIC16.72■□□□□ 0.27
RPA3P35244 AL589182.2-201ENST00000619332 1049 ntBASIC16.72■□□□□ 0.27
RPA3P35244 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.72■□□□□ 0.27
RPA3P35244 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPA3P35244 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPA3P35244 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.72■□□□□ 0.27
RPA3P35244 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPA3P35244 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPA3P35244 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RPA3P35244 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPA3P35244 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RPA3P35244 AL512652.2-201ENST00000625156 1716 ntBASIC16.72■□□□□ 0.27
RPA3P35244 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPA3P35244 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RPA3P35244 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPA3P35244 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RPA3P35244 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPA3P35244 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RPA3P35244 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.72■□□□□ 0.27
RPA3P35244 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.72■□□□□ 0.27
RPA3P35244 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.72■□□□□ 0.27
RPA3P35244 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.72■□□□□ 0.27
RPA3P35244 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RPA3P35244 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPA3P35244 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RPA3P35244 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
RPA3P35244 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RPA3P35244 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPA3P35244 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.71■□□□□ 0.27
RPA3P35244 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPA3P35244 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.71■□□□□ 0.27
RPA3P35244 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPA3P35244 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPA3P35244 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RPA3P35244 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPA3P35244 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.71■□□□□ 0.27
RPA3P35244 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RPA3P35244 KRT18P67-201ENST00000432816 1264 ntBASIC16.71■□□□□ 0.27
RPA3P35244 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.71■□□□□ 0.27
RPA3P35244 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.71■□□□□ 0.27
RPA3P35244 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.71■□□□□ 0.27
RPA3P35244 OR7E14P-202ENST00000530490 1290 ntBASIC16.71■□□□□ 0.27
RPA3P35244 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.71■□□□□ 0.27
RPA3P35244 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.71■□□□□ 0.27
RPA3P35244 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.71■□□□□ 0.27
RPA3P35244 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.71■□□□□ 0.27
RPA3P35244 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
RPA3P35244 AC013268.4-201ENST00000637413 2228 ntBASIC16.71■□□□□ 0.27
RPA3P35244 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPA3P35244 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPA3P35244 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RPA3P35244 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RPA3P35244 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPA3P35244 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPA3P35244 AL031731.1-201ENST00000642131 2094 ntBASIC16.71■□□□□ 0.27
RPA3P35244 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RPA3P35244 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPA3P35244 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
RPA3P35244 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.7■□□□□ 0.26
RPA3P35244 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.7■□□□□ 0.26
RPA3P35244 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPA3P35244 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPA3P35244 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.7■□□□□ 0.26
RPA3P35244 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPA3P35244 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.7■□□□□ 0.26
RPA3P35244 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPA3P35244 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPA3P35244 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPA3P35244 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
RPA3P35244 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPA3P35244 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPA3P35244 AC243591.1-201ENST00000452967 1364 ntBASIC16.7■□□□□ 0.26
RPA3P35244 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms