Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
CHRNA3P32297 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.43■□□□□ 0.38
CHRNA3P32297 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA3P32297 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA3P32297 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA3P32297 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA3P32297 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA3P32297 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CHRNA3P32297 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA3P32297 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.43■□□□□ 0.38
CHRNA3P32297 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CHRNA3P32297 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CHRNA3P32297 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA3P32297 CRYGEP-201ENST00000412192 528 ntBASIC17.43■□□□□ 0.38
CHRNA3P32297 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.43■□□□□ 0.38
CHRNA3P32297 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.43■□□□□ 0.38
CHRNA3P32297 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA3P32297 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.43■□□□□ 0.38
CHRNA3P32297 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.43■□□□□ 0.38
CHRNA3P32297 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.43■□□□□ 0.38
CHRNA3P32297 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.43■□□□□ 0.38
CHRNA3P32297 MIR4751-201ENST00000578027 74 ntBASIC17.43■□□□□ 0.38
CHRNA3P32297 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.43■□□□□ 0.38
CHRNA3P32297 AC064836.3-201ENST00000607928 673 ntBASIC17.43■□□□□ 0.38
CHRNA3P32297 AC004790.2-201ENST00000623588 572 ntBASIC17.43■□□□□ 0.38
CHRNA3P32297 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA3P32297 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CHRNA3P32297 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA3P32297 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA3P32297 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CHRNA3P32297 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA3P32297 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.43■□□□□ 0.38
CHRNA3P32297 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.43■□□□□ 0.38
CHRNA3P32297 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA3P32297 SNX33P1-201ENST00000592116 1762 ntBASIC17.43■□□□□ 0.38
CHRNA3P32297 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA3P32297 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA3P32297 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.43■□□□□ 0.38
CHRNA3P32297 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA3P32297 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA3P32297 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA3P32297 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CHRNA3P32297 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.42■□□□□ 0.38
CHRNA3P32297 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA3P32297 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA3P32297 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA3P32297 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA3P32297 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA3P32297 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA3P32297 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA3P32297 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
CHRNA3P32297 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.42■□□□□ 0.38
CHRNA3P32297 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA3P32297 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.42■□□□□ 0.38
CHRNA3P32297 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA3P32297 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
CHRNA3P32297 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.42■□□□□ 0.38
CHRNA3P32297 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.42■□□□□ 0.38
CHRNA3P32297 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.42■□□□□ 0.38
CHRNA3P32297 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.42■□□□□ 0.38
CHRNA3P32297 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.42■□□□□ 0.38
CHRNA3P32297 GGTLC5P-201ENST00000617623 998 ntBASIC17.42■□□□□ 0.38
CHRNA3P32297 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.42■□□□□ 0.38
CHRNA3P32297 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA3P32297 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.42■□□□□ 0.38
CHRNA3P32297 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.42■□□□□ 0.38
CHRNA3P32297 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA3P32297 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA3P32297 AL603832.2-201ENST00000566195 2125 ntBASIC17.42■□□□□ 0.38
CHRNA3P32297 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA3P32297 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA3P32297 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.42■□□□□ 0.38
CHRNA3P32297 AL671710.1-201ENST00000610245 2349 ntBASIC17.42■□□□□ 0.38
CHRNA3P32297 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CHRNA3P32297 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA3P32297 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.42■□□□□ 0.38
CHRNA3P32297 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA3P32297 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA3P32297 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.42■□□□□ 0.38
CHRNA3P32297 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.42■□□□□ 0.38
CHRNA3P32297 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA3P32297 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.42■□□□□ 0.38
CHRNA3P32297 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNA3P32297 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNA3P32297 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CHRNA3P32297 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNA3P32297 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.41■□□□□ 0.38
CHRNA3P32297 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNA3P32297 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CHRNA3P32297 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNA3P32297 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNA3P32297 GGT4P-201ENST00000623672 1708 ntBASIC17.41■□□□□ 0.38
CHRNA3P32297 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNA3P32297 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNA3P32297 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNA3P32297 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNA3P32297 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CHRNA3P32297 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.41■□□□□ 0.38
CHRNA3P32297 PRSS29P-201ENST00000440800 595 ntBASIC17.41■□□□□ 0.38
CHRNA3P32297 VN2R19P-201ENST00000442399 1052 ntBASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms