Protein–RNA interactions for Protein: P26992

CNTFR, Ciliary neurotrophic factor receptor subunit alpha, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFRP26992 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
CNTFRP26992 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.3□□□□□ -0.28
CNTFRP26992 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
CNTFRP26992 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CNTFRP26992 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CNTFRP26992 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CNTFRP26992 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
CNTFRP26992 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CNTFRP26992 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CNTFRP26992 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CNTFRP26992 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CNTFRP26992 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CNTFRP26992 DOC2GP-204ENST00000639052 2548 ntBASIC13.3□□□□□ -0.28
CNTFRP26992 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNTFRP26992 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.29□□□□□ -0.28
CNTFRP26992 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CNTFRP26992 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.29□□□□□ -0.28
CNTFRP26992 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.29□□□□□ -0.28
CNTFRP26992 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.29□□□□□ -0.28
CNTFRP26992 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CNTFRP26992 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CNTFRP26992 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
CNTFRP26992 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CNTFRP26992 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNTFRP26992 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNTFRP26992 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
CNTFRP26992 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.29□□□□□ -0.28
CNTFRP26992 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNTFRP26992 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNTFRP26992 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNTFRP26992 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNTFRP26992 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.29□□□□□ -0.28
CNTFRP26992 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.29□□□□□ -0.28
CNTFRP26992 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CNTFRP26992 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.29□□□□□ -0.28
CNTFRP26992 AL591424.1-201ENST00000442569 1213 ntBASIC13.29□□□□□ -0.28
CNTFRP26992 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.29□□□□□ -0.28
CNTFRP26992 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNTFRP26992 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNTFRP26992 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.29□□□□□ -0.28
CNTFRP26992 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.29□□□□□ -0.28
CNTFRP26992 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.29□□□□□ -0.28
CNTFRP26992 FAM197Y3-203ENST00000618346 717 ntBASIC13.29□□□□□ -0.28
CNTFRP26992 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNTFRP26992 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.29□□□□□ -0.28
CNTFRP26992 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNTFRP26992 AC008741.2-201ENST00000612792 3115 ntBASIC13.29□□□□□ -0.28
CNTFRP26992 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNTFRP26992 LINC02199-201ENST00000506655 2702 ntBASIC13.29□□□□□ -0.28
CNTFRP26992 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CNTFRP26992 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNTFRP26992 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
CNTFRP26992 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CNTFRP26992 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CNTFRP26992 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNTFRP26992 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNTFRP26992 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.29□□□□□ -0.28
CNTFRP26992 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CNTFRP26992 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.29□□□□□ -0.28
CNTFRP26992 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CNTFRP26992 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.29□□□□□ -0.28
CNTFRP26992 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTFRP26992 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.28□□□□□ -0.28
CNTFRP26992 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.28□□□□□ -0.28
CNTFRP26992 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CNTFRP26992 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CNTFRP26992 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTFRP26992 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTFRP26992 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.28□□□□□ -0.28
CNTFRP26992 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.28□□□□□ -0.28
CNTFRP26992 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CNTFRP26992 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.28□□□□□ -0.28
CNTFRP26992 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTFRP26992 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTFRP26992 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTFRP26992 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CNTFRP26992 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTFRP26992 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTFRP26992 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CNTFRP26992 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.28□□□□□ -0.28
CNTFRP26992 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CNTFRP26992 MIR574-201ENST00000385209 96 ntBASIC13.28□□□□□ -0.28
CNTFRP26992 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.28□□□□□ -0.28
CNTFRP26992 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.28□□□□□ -0.28
CNTFRP26992 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CNTFRP26992 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.28□□□□□ -0.28
CNTFRP26992 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.28□□□□□ -0.28
CNTFRP26992 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CNTFRP26992 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.28□□□□□ -0.28
CNTFRP26992 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTFRP26992 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTFRP26992 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTFRP26992 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.28□□□□□ -0.28
CNTFRP26992 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTFRP26992 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTFRP26992 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.28□□□□□ -0.28
CNTFRP26992 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTFRP26992 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CNTFRP26992 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTFRP26992 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms