Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.82■□□□□ 0.28
PTPN3P26045 AC074386.1-202ENST00000463561 864 ntBASIC16.82■□□□□ 0.28
PTPN3P26045 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PTPN3P26045 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN3P26045 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.82■□□□□ 0.28
PTPN3P26045 AC068137.2-201ENST00000605408 478 ntBASIC16.82■□□□□ 0.28
PTPN3P26045 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.82■□□□□ 0.28
PTPN3P26045 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.82■□□□□ 0.28
PTPN3P26045 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.82■□□□□ 0.28
PTPN3P26045 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN3P26045 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN3P26045 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN3P26045 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.82■□□□□ 0.28
PTPN3P26045 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.82■□□□□ 0.28
PTPN3P26045 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN3P26045 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PTPN3P26045 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.81■□□□□ 0.28
PTPN3P26045 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.81■□□□□ 0.28
PTPN3P26045 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN3P26045 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN3P26045 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.81■□□□□ 0.28
PTPN3P26045 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN3P26045 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.81■□□□□ 0.28
PTPN3P26045 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN3P26045 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN3P26045 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.81■□□□□ 0.28
PTPN3P26045 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN3P26045 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN3P26045 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.81■□□□□ 0.28
PTPN3P26045 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
PTPN3P26045 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.81■□□□□ 0.28
PTPN3P26045 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.81■□□□□ 0.28
PTPN3P26045 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.81■□□□□ 0.28
PTPN3P26045 AL078644.1-201ENST00000609881 752 ntBASIC16.81■□□□□ 0.28
PTPN3P26045 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PTPN3P26045 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN3P26045 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN3P26045 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.81■□□□□ 0.28
PTPN3P26045 AC016027.1-202ENST00000607927 1699 ntBASIC16.81■□□□□ 0.28
PTPN3P26045 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN3P26045 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.81■□□□□ 0.28
PTPN3P26045 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
PTPN3P26045 LINC02199-201ENST00000506655 2702 ntBASIC16.81■□□□□ 0.28
PTPN3P26045 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.81■□□□□ 0.28
PTPN3P26045 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PTPN3P26045 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.81■□□□□ 0.28
PTPN3P26045 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN3P26045 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PTPN3P26045 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.8■□□□□ 0.28
PTPN3P26045 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN3P26045 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN3P26045 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
PTPN3P26045 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
PTPN3P26045 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
PTPN3P26045 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN3P26045 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PTPN3P26045 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN3P26045 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN3P26045 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN3P26045 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.8■□□□□ 0.28
PTPN3P26045 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN3P26045 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.8■□□□□ 0.28
PTPN3P26045 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN3P26045 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.8■□□□□ 0.28
PTPN3P26045 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN3P26045 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.8■□□□□ 0.28
PTPN3P26045 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PTPN3P26045 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.8■□□□□ 0.28
PTPN3P26045 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN3P26045 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.8■□□□□ 0.28
PTPN3P26045 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.8■□□□□ 0.28
PTPN3P26045 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.8■□□□□ 0.28
PTPN3P26045 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.8■□□□□ 0.28
PTPN3P26045 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.8■□□□□ 0.28
PTPN3P26045 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.8■□□□□ 0.28
PTPN3P26045 AP002472.1-201ENST00000577490 586 ntBASIC16.8■□□□□ 0.28
PTPN3P26045 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.8■□□□□ 0.28
PTPN3P26045 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN3P26045 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN3P26045 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.8■□□□□ 0.28
PTPN3P26045 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.8■□□□□ 0.28
PTPN3P26045 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN3P26045 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PTPN3P26045 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.8■□□□□ 0.28
PTPN3P26045 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.8■□□□□ 0.28
PTPN3P26045 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN3P26045 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PTPN3P26045 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN3P26045 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN3P26045 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PTPN3P26045 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.8■□□□□ 0.28
PTPN3P26045 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN3P26045 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.79■□□□□ 0.28
PTPN3P26045 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN3P26045 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN3P26045 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.79■□□□□ 0.28
PTPN3P26045 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN3P26045 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PTPN3P26045 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PTPN3P26045 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms