Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
LMO1P25800 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.87□□□□□ -0.19
LMO1P25800 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
LMO1P25800 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LMO1P25800 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.87□□□□□ -0.19
LMO1P25800 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.87□□□□□ -0.19
LMO1P25800 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LMO1P25800 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.87□□□□□ -0.19
LMO1P25800 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.87□□□□□ -0.19
LMO1P25800 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.87□□□□□ -0.19
LMO1P25800 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LMO1P25800 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LMO1P25800 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
LMO1P25800 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.87□□□□□ -0.19
LMO1P25800 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.87□□□□□ -0.19
LMO1P25800 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.87□□□□□ -0.19
LMO1P25800 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.87□□□□□ -0.19
LMO1P25800 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.87□□□□□ -0.19
LMO1P25800 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.87□□□□□ -0.19
LMO1P25800 GPALPP1-207ENST00000611650 899 ntBASIC13.87□□□□□ -0.19
LMO1P25800 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.87□□□□□ -0.19
LMO1P25800 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LMO1P25800 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LMO1P25800 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.87□□□□□ -0.19
LMO1P25800 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LMO1P25800 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
LMO1P25800 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LMO1P25800 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LMO1P25800 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LMO1P25800 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
LMO1P25800 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
LMO1P25800 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LMO1P25800 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
LMO1P25800 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LMO1P25800 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LMO1P25800 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.87□□□□□ -0.19
LMO1P25800 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LMO1P25800 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LMO1P25800 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LMO1P25800 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO1P25800 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
LMO1P25800 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO1P25800 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO1P25800 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
LMO1P25800 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LMO1P25800 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO1P25800 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
LMO1P25800 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.86□□□□□ -0.19
LMO1P25800 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO1P25800 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LMO1P25800 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LMO1P25800 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO1P25800 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO1P25800 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.86□□□□□ -0.19
LMO1P25800 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.86□□□□□ -0.19
LMO1P25800 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LMO1P25800 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO1P25800 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO1P25800 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC13.86□□□□□ -0.19
LMO1P25800 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO1P25800 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.86□□□□□ -0.19
LMO1P25800 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO1P25800 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
LMO1P25800 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
LMO1P25800 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.86□□□□□ -0.19
LMO1P25800 AL031055.1-201ENST00000606362 631 ntBASIC13.86□□□□□ -0.19
LMO1P25800 AC007064.4-201ENST00000637740 555 ntBASIC13.86□□□□□ -0.19
LMO1P25800 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO1P25800 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LMO1P25800 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.86□□□□□ -0.19
LMO1P25800 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO1P25800 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LMO1P25800 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO1P25800 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO1P25800 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LMO1P25800 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.86□□□□□ -0.19
LMO1P25800 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO1P25800 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO1P25800 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LMO1P25800 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO1P25800 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO1P25800 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LMO1P25800 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
LMO1P25800 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
LMO1P25800 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LMO1P25800 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LMO1P25800 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
LMO1P25800 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LMO1P25800 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.85□□□□□ -0.19
LMO1P25800 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LMO1P25800 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.85□□□□□ -0.19
LMO1P25800 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LMO1P25800 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
LMO1P25800 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LMO1P25800 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LMO1P25800 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LMO1P25800 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LMO1P25800 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
LMO1P25800 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LMO1P25800 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms