Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LAMA1P25391 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
LAMA1P25391 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LAMA1P25391 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LAMA1P25391 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LAMA1P25391 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.88■□□□□ 0.13
LAMA1P25391 SPDYE17-201ENST00000412399 783 ntBASIC15.88■□□□□ 0.13
LAMA1P25391 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LAMA1P25391 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.88■□□□□ 0.13
LAMA1P25391 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.88■□□□□ 0.13
LAMA1P25391 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LAMA1P25391 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.88■□□□□ 0.13
LAMA1P25391 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
LAMA1P25391 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.87■□□□□ 0.13
LAMA1P25391 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.87■□□□□ 0.13
LAMA1P25391 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
LAMA1P25391 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LAMA1P25391 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
LAMA1P25391 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LAMA1P25391 BCRP2-202ENST00000447763 634 ntBASIC15.87■□□□□ 0.13
LAMA1P25391 BCRP6-201ENST00000510112 632 ntBASIC15.87■□□□□ 0.13
LAMA1P25391 BCRP7-201ENST00000511549 544 ntBASIC15.87■□□□□ 0.13
LAMA1P25391 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.87■□□□□ 0.13
LAMA1P25391 C2orf69P2-201ENST00000562032 1123 ntBASIC15.87■□□□□ 0.13
LAMA1P25391 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LAMA1P25391 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.87■□□□□ 0.13
LAMA1P25391 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LAMA1P25391 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LAMA1P25391 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LAMA1P25391 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
LAMA1P25391 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LAMA1P25391 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
LAMA1P25391 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
LAMA1P25391 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.87■□□□□ 0.13
LAMA1P25391 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
LAMA1P25391 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LAMA1P25391 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
LAMA1P25391 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.87■□□□□ 0.13
LAMA1P25391 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LAMA1P25391 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.87■□□□□ 0.13
LAMA1P25391 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
LAMA1P25391 RN7SL190P-201ENST00000582519 257 ntBASIC15.87■□□□□ 0.13
LAMA1P25391 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.87■□□□□ 0.13
LAMA1P25391 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.87■□□□□ 0.13
LAMA1P25391 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LAMA1P25391 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
LAMA1P25391 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.87■□□□□ 0.13
LAMA1P25391 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
LAMA1P25391 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LAMA1P25391 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LAMA1P25391 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LAMA1P25391 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.86■□□□□ 0.13
LAMA1P25391 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC15.86■□□□□ 0.13
LAMA1P25391 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.86■□□□□ 0.13
LAMA1P25391 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.86■□□□□ 0.13
LAMA1P25391 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.86■□□□□ 0.13
LAMA1P25391 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.86■□□□□ 0.13
LAMA1P25391 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LAMA1P25391 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.86■□□□□ 0.13
LAMA1P25391 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LAMA1P25391 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.86■□□□□ 0.13
LAMA1P25391 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LAMA1P25391 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LAMA1P25391 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LAMA1P25391 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.86■□□□□ 0.13
LAMA1P25391 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.86■□□□□ 0.13
LAMA1P25391 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LAMA1P25391 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LAMA1P25391 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.86■□□□□ 0.13
LAMA1P25391 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LAMA1P25391 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
LAMA1P25391 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.86■□□□□ 0.13
LAMA1P25391 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.86■□□□□ 0.13
LAMA1P25391 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.86■□□□□ 0.13
LAMA1P25391 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.86■□□□□ 0.13
LAMA1P25391 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.86■□□□□ 0.13
LAMA1P25391 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LAMA1P25391 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.86■□□□□ 0.13
LAMA1P25391 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LAMA1P25391 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LAMA1P25391 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LAMA1P25391 CLK3P2-201ENST00000427566 1453 ntBASIC15.86■□□□□ 0.13
LAMA1P25391 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
LAMA1P25391 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
LAMA1P25391 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.86■□□□□ 0.13
LAMA1P25391 AL162726.2-201ENST00000438986 1017 ntBASIC15.86■□□□□ 0.13
LAMA1P25391 AC108725.1-201ENST00000495472 409 ntBASIC15.86■□□□□ 0.13
LAMA1P25391 AC025048.3-201ENST00000590609 569 ntBASIC15.86■□□□□ 0.13
LAMA1P25391 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.86■□□□□ 0.13
LAMA1P25391 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.86■□□□□ 0.13
LAMA1P25391 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LAMA1P25391 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LAMA1P25391 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
LAMA1P25391 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.85■□□□□ 0.13
LAMA1P25391 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
LAMA1P25391 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.85■□□□□ 0.13
LAMA1P25391 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LAMA1P25391 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.85■□□□□ 0.13
LAMA1P25391 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
LAMA1P25391 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms