Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.18□□□□□ -0.14
CCL1P22362 AL031008.1-201ENST00000619963 541 ntBASIC14.18□□□□□ -0.14
CCL1P22362 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.18□□□□□ -0.14
CCL1P22362 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CCL1P22362 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL1P22362 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCL1P22362 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.18□□□□□ -0.14
CCL1P22362 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL1P22362 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL1P22362 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL1P22362 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL1P22362 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CCL1P22362 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL1P22362 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL1P22362 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL1P22362 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCL1P22362 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCL1P22362 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CCL1P22362 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
CCL1P22362 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL1P22362 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL1P22362 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL1P22362 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL1P22362 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.17□□□□□ -0.14
CCL1P22362 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.17□□□□□ -0.14
CCL1P22362 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCL1P22362 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL1P22362 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.17□□□□□ -0.14
CCL1P22362 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.17□□□□□ -0.14
CCL1P22362 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCL1P22362 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL1P22362 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL1P22362 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL1P22362 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.17□□□□□ -0.14
CCL1P22362 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.17□□□□□ -0.14
CCL1P22362 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCL1P22362 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.17□□□□□ -0.14
CCL1P22362 UNC93B6-202ENST00000528242 690 ntBASIC14.17□□□□□ -0.14
CCL1P22362 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL1P22362 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.17□□□□□ -0.14
CCL1P22362 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
CCL1P22362 AC096734.2-201ENST00000562054 433 ntBASIC14.17□□□□□ -0.14
CCL1P22362 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.17□□□□□ -0.14
CCL1P22362 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CCL1P22362 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCL1P22362 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.17□□□□□ -0.14
CCL1P22362 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
CCL1P22362 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CCL1P22362 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.17□□□□□ -0.14
CCL1P22362 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.17□□□□□ -0.14
CCL1P22362 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL1P22362 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL1P22362 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL1P22362 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CCL1P22362 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.17□□□□□ -0.14
CCL1P22362 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL1P22362 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL1P22362 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL1P22362 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL1P22362 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL1P22362 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL1P22362 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL1P22362 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCL1P22362 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CCL1P22362 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CCL1P22362 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL1P22362 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL1P22362 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.17□□□□□ -0.14
CCL1P22362 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.16□□□□□ -0.14
CCL1P22362 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL1P22362 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CCL1P22362 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCL1P22362 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL1P22362 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CCL1P22362 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCL1P22362 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL1P22362 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.16□□□□□ -0.14
CCL1P22362 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL1P22362 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.16□□□□□ -0.14
CCL1P22362 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL1P22362 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL1P22362 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CCL1P22362 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL1P22362 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL1P22362 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL1P22362 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.16□□□□□ -0.14
CCL1P22362 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL1P22362 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.16□□□□□ -0.14
CCL1P22362 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL1P22362 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.16□□□□□ -0.14
CCL1P22362 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL1P22362 CRYGEP-201ENST00000412192 528 ntBASIC14.16□□□□□ -0.14
CCL1P22362 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCL1P22362 AC245100.5-201ENST00000452108 331 ntBASIC14.16□□□□□ -0.14
CCL1P22362 RNA5SP419-201ENST00000515908 135 ntBASIC14.16□□□□□ -0.14
CCL1P22362 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.16□□□□□ -0.14
CCL1P22362 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
CCL1P22362 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.16□□□□□ -0.14
CCL1P22362 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.16□□□□□ -0.14
CCL1P22362 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 589.5 ms