Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL11A2P13942 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL11A2P13942 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC19.77■□□□□ 0.76
COL11A2P13942 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL11A2P13942 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC19.77■□□□□ 0.76
COL11A2P13942 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC19.77■□□□□ 0.76
COL11A2P13942 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
COL11A2P13942 RHOQP1-201ENST00000555758 579 ntBASIC19.77■□□□□ 0.76
COL11A2P13942 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC19.77■□□□□ 0.76
COL11A2P13942 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.77■□□□□ 0.76
COL11A2P13942 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
COL11A2P13942 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.77■□□□□ 0.76
COL11A2P13942 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL11A2P13942 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL11A2P13942 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL11A2P13942 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
COL11A2P13942 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
COL11A2P13942 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
COL11A2P13942 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.75
COL11A2P13942 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
COL11A2P13942 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
COL11A2P13942 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.77■□□□□ 0.75
COL11A2P13942 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC19.77■□□□□ 0.75
COL11A2P13942 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
COL11A2P13942 AC006033.1-201ENST00000440505 426 ntBASIC19.76■□□□□ 0.75
COL11A2P13942 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC19.76■□□□□ 0.75
COL11A2P13942 PARP8-218ENST00000513738 596 ntTSL 4 BASIC19.76■□□□□ 0.75
COL11A2P13942 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC19.76■□□□□ 0.75
COL11A2P13942 ARL16-210ENST00000574938 751 ntTSL 2 BASIC19.76■□□□□ 0.75
COL11A2P13942 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL11A2P13942 LOX-206ENST00000639739 1626 ntTSL 5 BASIC19.76■□□□□ 0.75
COL11A2P13942 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL11A2P13942 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL11A2P13942 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL11A2P13942 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL11A2P13942 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL11A2P13942 NOC2LP2-201ENST00000407594 1944 ntBASIC19.76■□□□□ 0.75
COL11A2P13942 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL11A2P13942 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
COL11A2P13942 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL11A2P13942 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL11A2P13942 GPAA1P2-201ENST00000417923 928 ntBASIC19.76■□□□□ 0.75
COL11A2P13942 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC19.76■□□□□ 0.75
COL11A2P13942 VDAC1P7-201ENST00000462417 847 ntBASIC19.76■□□□□ 0.75
COL11A2P13942 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL11A2P13942 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC19.76■□□□□ 0.75
COL11A2P13942 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC19.76■□□□□ 0.75
COL11A2P13942 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC19.76■□□□□ 0.75
COL11A2P13942 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
COL11A2P13942 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC19.76■□□□□ 0.75
COL11A2P13942 RHOXF1P1-202ENST00000635473 501 ntBASIC19.76■□□□□ 0.75
COL11A2P13942 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL11A2P13942 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.76■□□□□ 0.75
COL11A2P13942 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL11A2P13942 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL11A2P13942 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
COL11A2P13942 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL11A2P13942 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL11A2P13942 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL11A2P13942 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
COL11A2P13942 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.75■□□□□ 0.75
COL11A2P13942 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL11A2P13942 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
COL11A2P13942 AC007969.1-201ENST00000433675 447 ntBASIC19.75■□□□□ 0.75
COL11A2P13942 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL11A2P13942 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL11A2P13942 HNRNPUP1-201ENST00000554987 333 ntBASIC19.75■□□□□ 0.75
COL11A2P13942 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC19.75■□□□□ 0.75
COL11A2P13942 CLUHP6-201ENST00000580789 941 ntBASIC19.75■□□□□ 0.75
COL11A2P13942 MIR3615-201ENST00000581999 87 ntBASIC19.75■□□□□ 0.75
COL11A2P13942 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC19.75■□□□□ 0.75
COL11A2P13942 AC005622.1-201ENST00000636801 1703 ntBASIC19.75■□□□□ 0.75
COL11A2P13942 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
COL11A2P13942 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL11A2P13942 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
COL11A2P13942 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC19.75■□□□□ 0.75
COL11A2P13942 AC006538.1-201ENST00000567905 1585 ntBASIC19.75■□□□□ 0.75
COL11A2P13942 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL11A2P13942 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.74■□□□□ 0.75
COL11A2P13942 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL11A2P13942 IGHJ2P-201ENST00000454480 60 ntBASIC19.74■□□□□ 0.75
COL11A2P13942 SLED1-202ENST00000512051 380 ntBASIC19.74■□□□□ 0.75
COL11A2P13942 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC19.74■□□□□ 0.75
COL11A2P13942 AC010328.2-201ENST00000597698 1111 ntBASIC19.74■□□□□ 0.75
COL11A2P13942 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.74■□□□□ 0.75
COL11A2P13942 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC19.74■□□□□ 0.75
COL11A2P13942 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL11A2P13942 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL11A2P13942 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
COL11A2P13942 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL11A2P13942 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.74■□□□□ 0.75
COL11A2P13942 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL11A2P13942 HLA-A-202ENST00000376806 1854 ntBASIC19.74■□□□□ 0.75
COL11A2P13942 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.74■□□□□ 0.75
COL11A2P13942 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.74■□□□□ 0.75
COL11A2P13942 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.74■□□□□ 0.75
COL11A2P13942 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.74■□□□□ 0.75
COL11A2P13942 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC19.74■□□□□ 0.75
COL11A2P13942 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
COL11A2P13942 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms