Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
CCL2P13500 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
CCL2P13500 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL2P13500 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL2P13500 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL2P13500 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL2P13500 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL2P13500 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCL2P13500 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCL2P13500 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.4□□□□□ -0.1
CCL2P13500 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
CCL2P13500 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCL2P13500 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.4□□□□□ -0.1
CCL2P13500 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCL2P13500 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.4□□□□□ -0.1
CCL2P13500 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCL2P13500 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CCL2P13500 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL2P13500 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.39□□□□□ -0.11
CCL2P13500 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL2P13500 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCL2P13500 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL2P13500 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL2P13500 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CCL2P13500 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL2P13500 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCL2P13500 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CCL2P13500 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.39□□□□□ -0.11
CCL2P13500 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCL2P13500 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.39□□□□□ -0.11
CCL2P13500 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.39□□□□□ -0.11
CCL2P13500 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.39□□□□□ -0.11
CCL2P13500 GPX1P2-201ENST00000429271 606 ntBASIC14.39□□□□□ -0.11
CCL2P13500 HTR5BP-201ENST00000430851 1154 ntBASIC14.39□□□□□ -0.11
CCL2P13500 DNAJB3-201ENST00000446806 729 ntBASIC14.39□□□□□ -0.11
CCL2P13500 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.39□□□□□ -0.11
CCL2P13500 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCL2P13500 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CCL2P13500 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CCL2P13500 AC109635.5-201ENST00000533593 962 ntBASIC14.39□□□□□ -0.11
CCL2P13500 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.39□□□□□ -0.11
CCL2P13500 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.39□□□□□ -0.11
CCL2P13500 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.39□□□□□ -0.11
CCL2P13500 MIR3687-2-201ENST00000577708 61 ntBASIC14.39□□□□□ -0.11
CCL2P13500 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.39□□□□□ -0.11
CCL2P13500 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.39□□□□□ -0.11
CCL2P13500 MIR3687-1-201ENST00000614492 61 ntBASIC14.39□□□□□ -0.11
CCL2P13500 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.39□□□□□ -0.11
CCL2P13500 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CCL2P13500 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL2P13500 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL2P13500 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
CCL2P13500 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL2P13500 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL2P13500 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCL2P13500 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCL2P13500 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
CCL2P13500 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCL2P13500 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL2P13500 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL2P13500 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL2P13500 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCL2P13500 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL2P13500 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
CCL2P13500 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CCL2P13500 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.38□□□□□ -0.11
CCL2P13500 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL2P13500 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL2P13500 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL2P13500 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL2P13500 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.38□□□□□ -0.11
CCL2P13500 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.38□□□□□ -0.11
CCL2P13500 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL2P13500 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL2P13500 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CCL2P13500 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL2P13500 PCGF3-213ENST00000620529 1899 ntBASIC14.38□□□□□ -0.11
CCL2P13500 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL2P13500 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL2P13500 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL2P13500 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.38□□□□□ -0.11
CCL2P13500 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL2P13500 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL2P13500 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL2P13500 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.38□□□□□ -0.11
CCL2P13500 RPSAP43-201ENST00000402237 625 ntBASIC14.38□□□□□ -0.11
CCL2P13500 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.38□□□□□ -0.11
CCL2P13500 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.38□□□□□ -0.11
CCL2P13500 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.38□□□□□ -0.11
CCL2P13500 CEND1P1-201ENST00000451006 455 ntBASIC14.38□□□□□ -0.11
CCL2P13500 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CCL2P13500 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.38□□□□□ -0.11
CCL2P13500 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.38□□□□□ -0.11
CCL2P13500 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
CCL2P13500 AC005829.1-201ENST00000570002 483 ntBASIC14.38□□□□□ -0.11
CCL2P13500 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.38□□□□□ -0.11
CCL2P13500 MIR3909-201ENST00000579518 119 ntBASIC14.38□□□□□ -0.11
CCL2P13500 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CCL2P13500 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL2P13500 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms