Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.37■□□□□ 0.53
RARBP10826 MEP1AP4-201ENST00000423244 1087 ntBASIC18.37■□□□□ 0.53
RARBP10826 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RARBP10826 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RARBP10826 SDHAP3-202ENST00000515467 728 ntBASIC18.37■□□□□ 0.53
RARBP10826 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.37■□□□□ 0.53
RARBP10826 TPRX2P-201ENST00000535362 881 ntBASIC18.37■□□□□ 0.53
RARBP10826 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.37■□□□□ 0.53
RARBP10826 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.37■□□□□ 0.53
RARBP10826 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.37■□□□□ 0.53
RARBP10826 SRD5A3P1-201ENST00000603021 949 ntBASIC18.37■□□□□ 0.53
RARBP10826 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.37■□□□□ 0.53
RARBP10826 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.37■□□□□ 0.53
RARBP10826 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RARBP10826 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RARBP10826 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.37■□□□□ 0.53
RARBP10826 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
RARBP10826 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.37■□□□□ 0.53
RARBP10826 KRT8P12-202ENST00000472924 1397 ntBASIC18.37■□□□□ 0.53
RARBP10826 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RARBP10826 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RARBP10826 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RARBP10826 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RARBP10826 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
RARBP10826 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RARBP10826 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.37■□□□□ 0.53
RARBP10826 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.37■□□□□ 0.53
RARBP10826 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RARBP10826 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RARBP10826 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RARBP10826 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.36■□□□□ 0.53
RARBP10826 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RARBP10826 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RARBP10826 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RARBP10826 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RARBP10826 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RARBP10826 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RARBP10826 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RARBP10826 MIR658-201ENST00000385210 100 ntBASIC18.36■□□□□ 0.53
RARBP10826 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RARBP10826 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
RARBP10826 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.36■□□□□ 0.53
RARBP10826 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.36■□□□□ 0.53
RARBP10826 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.36■□□□□ 0.53
RARBP10826 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.36■□□□□ 0.53
RARBP10826 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RARBP10826 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RARBP10826 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.36■□□□□ 0.53
RARBP10826 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.36■□□□□ 0.53
RARBP10826 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.36■□□□□ 0.53
RARBP10826 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.36■□□□□ 0.53
RARBP10826 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RARBP10826 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.36■□□□□ 0.53
RARBP10826 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RARBP10826 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
RARBP10826 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.36■□□□□ 0.53
RARBP10826 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.36■□□□□ 0.53
RARBP10826 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.36■□□□□ 0.53
RARBP10826 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RARBP10826 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RARBP10826 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RARBP10826 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.36■□□□□ 0.53
RARBP10826 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RARBP10826 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RARBP10826 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.35■□□□□ 0.53
RARBP10826 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RARBP10826 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RARBP10826 SNX33P1-201ENST00000592116 1762 ntBASIC18.35■□□□□ 0.53
RARBP10826 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RARBP10826 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.35■□□□□ 0.53
RARBP10826 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RARBP10826 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RARBP10826 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.35■□□□□ 0.53
RARBP10826 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.35■□□□□ 0.53
RARBP10826 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.35■□□□□ 0.53
RARBP10826 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
RARBP10826 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RARBP10826 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RARBP10826 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.35■□□□□ 0.53
RARBP10826 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RARBP10826 TTTY23B-201ENST00000442790 549 ntBASIC18.35■□□□□ 0.53
RARBP10826 AC093724.1-201ENST00000448659 1027 ntBASIC18.35■□□□□ 0.53
RARBP10826 MYCLP2-201ENST00000449268 967 ntBASIC18.35■□□□□ 0.53
RARBP10826 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.35■□□□□ 0.53
RARBP10826 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.35■□□□□ 0.53
RARBP10826 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.35■□□□□ 0.53
RARBP10826 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.35■□□□□ 0.53
RARBP10826 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RARBP10826 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.35■□□□□ 0.53
RARBP10826 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RARBP10826 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RARBP10826 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RARBP10826 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RARBP10826 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RARBP10826 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RARBP10826 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RARBP10826 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RARBP10826 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.35■□□□□ 0.53
RARBP10826 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.34■□□□□ 0.53
RARBP10826 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms