Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.91■□□□□ 0.46
CCDC172P0C7W6 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC172P0C7W6 AC008735.5-201ENST00000623544 497 ntBASIC17.91■□□□□ 0.46
CCDC172P0C7W6 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC172P0C7W6 GGT4P-201ENST00000623672 1708 ntBASIC17.91■□□□□ 0.46
CCDC172P0C7W6 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC172P0C7W6 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC172P0C7W6 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC172P0C7W6 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC172P0C7W6 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC172P0C7W6 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC172P0C7W6 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC172P0C7W6 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC172P0C7W6 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC172P0C7W6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC172P0C7W6 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
CCDC172P0C7W6 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.91■□□□□ 0.46
CCDC172P0C7W6 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC172P0C7W6 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
CCDC172P0C7W6 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CCDC172P0C7W6 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
CCDC172P0C7W6 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC172P0C7W6 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC172P0C7W6 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC172P0C7W6 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC172P0C7W6 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC172P0C7W6 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC172P0C7W6 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC172P0C7W6 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CCDC172P0C7W6 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC172P0C7W6 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CCDC172P0C7W6 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC172P0C7W6 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC172P0C7W6 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC172P0C7W6 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
CCDC172P0C7W6 GPAA1P2-202ENST00000606848 1787 ntBASIC17.9■□□□□ 0.46
CCDC172P0C7W6 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC172P0C7W6 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC172P0C7W6 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC172P0C7W6 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC172P0C7W6 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC172P0C7W6 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC172P0C7W6 IGHV3-65-201ENST00000523210 341 ntBASIC17.9■□□□□ 0.46
CCDC172P0C7W6 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC172P0C7W6 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.9■□□□□ 0.46
CCDC172P0C7W6 AC105339.3-201ENST00000560043 636 ntBASIC17.9■□□□□ 0.46
CCDC172P0C7W6 AC020765.3-201ENST00000613051 740 ntBASIC17.9■□□□□ 0.46
CCDC172P0C7W6 AC005593.1-201ENST00000624894 515 ntBASIC17.9■□□□□ 0.46
CCDC172P0C7W6 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CCDC172P0C7W6 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC172P0C7W6 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC172P0C7W6 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC172P0C7W6 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CCDC172P0C7W6 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC172P0C7W6 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC172P0C7W6 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
CCDC172P0C7W6 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC172P0C7W6 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC172P0C7W6 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC172P0C7W6 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC172P0C7W6 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
CCDC172P0C7W6 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC172P0C7W6 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC172P0C7W6 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.89■□□□□ 0.46
CCDC172P0C7W6 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.89■□□□□ 0.46
CCDC172P0C7W6 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC172P0C7W6 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC172P0C7W6 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC172P0C7W6 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.89■□□□□ 0.45
CCDC172P0C7W6 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
CCDC172P0C7W6 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.89■□□□□ 0.45
CCDC172P0C7W6 PCGF3-213ENST00000620529 1899 ntBASIC17.89■□□□□ 0.45
CCDC172P0C7W6 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC172P0C7W6 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CCDC172P0C7W6 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC172P0C7W6 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC172P0C7W6 AF186996.4-201ENST00000467186 377 ntBASIC17.89■□□□□ 0.45
CCDC172P0C7W6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.89■□□□□ 0.45
CCDC172P0C7W6 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.89■□□□□ 0.45
CCDC172P0C7W6 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC172P0C7W6 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC172P0C7W6 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC172P0C7W6 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC172P0C7W6 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC172P0C7W6 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC172P0C7W6 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CCDC172P0C7W6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC172P0C7W6 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC172P0C7W6 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC172P0C7W6 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CCDC172P0C7W6 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CCDC172P0C7W6 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC172P0C7W6 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC172P0C7W6 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CCDC172P0C7W6 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CCDC172P0C7W6 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC172P0C7W6 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC172P0C7W6 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC172P0C7W6 AC063926.3-201ENST00000624734 5658 ntBASIC17.88■□□□□ 0.45
CCDC172P0C7W6 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms