Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RETP07949 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.6■□□□□ 0.25
RETP07949 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RETP07949 AP3S2-216ENST00000617003 1561 ntBASIC16.6■□□□□ 0.25
RETP07949 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.6■□□□□ 0.25
RETP07949 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RETP07949 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RETP07949 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RETP07949 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.6■□□□□ 0.25
RETP07949 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RETP07949 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RETP07949 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RETP07949 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RETP07949 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RETP07949 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RETP07949 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.6■□□□□ 0.25
RETP07949 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RETP07949 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RETP07949 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RETP07949 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
RETP07949 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RETP07949 DFFBP1-201ENST00000433250 979 ntBASIC16.6■□□□□ 0.25
RETP07949 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RETP07949 AC092658.1-201ENST00000505836 891 ntBASIC16.6■□□□□ 0.25
RETP07949 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.6■□□□□ 0.25
RETP07949 KRT17P8-201ENST00000540749 863 ntBASIC16.6■□□□□ 0.25
RETP07949 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.6■□□□□ 0.25
RETP07949 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RETP07949 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.6■□□□□ 0.25
RETP07949 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.6■□□□□ 0.25
RETP07949 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.6■□□□□ 0.25
RETP07949 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RETP07949 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.6■□□□□ 0.25
RETP07949 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RETP07949 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RETP07949 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RETP07949 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RETP07949 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RETP07949 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.6■□□□□ 0.25
RETP07949 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RETP07949 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RETP07949 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RETP07949 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RETP07949 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RETP07949 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RETP07949 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RETP07949 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RETP07949 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RETP07949 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RETP07949 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.59■□□□□ 0.25
RETP07949 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RETP07949 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RETP07949 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
RETP07949 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RETP07949 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RETP07949 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.59■□□□□ 0.25
RETP07949 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RETP07949 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RETP07949 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RETP07949 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.59■□□□□ 0.25
RETP07949 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.59■□□□□ 0.25
RETP07949 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RETP07949 AC112492.5-201ENST00000421897 457 ntBASIC16.59■□□□□ 0.25
RETP07949 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.59■□□□□ 0.25
RETP07949 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.59■□□□□ 0.25
RETP07949 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.59■□□□□ 0.25
RETP07949 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RETP07949 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.59■□□□□ 0.25
RETP07949 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.59■□□□□ 0.25
RETP07949 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.59■□□□□ 0.25
RETP07949 AL138918.1-201ENST00000568306 659 ntBASIC16.59■□□□□ 0.25
RETP07949 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RETP07949 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RETP07949 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RETP07949 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RETP07949 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
RETP07949 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RETP07949 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RETP07949 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RETP07949 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.59■□□□□ 0.25
RETP07949 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.59■□□□□ 0.25
RETP07949 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RETP07949 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.59■□□□□ 0.25
RETP07949 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RETP07949 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
RETP07949 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RETP07949 AC016027.1-202ENST00000607927 1699 ntBASIC16.59■□□□□ 0.25
RETP07949 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RETP07949 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.58■□□□□ 0.25
RETP07949 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
RETP07949 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.58■□□□□ 0.25
RETP07949 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RETP07949 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.58■□□□□ 0.25
RETP07949 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.58■□□□□ 0.25
RETP07949 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RETP07949 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RETP07949 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.58■□□□□ 0.25
RETP07949 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RETP07949 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RETP07949 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms