Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
APOC1P02654 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
APOC1P02654 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOC1P02654 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
APOC1P02654 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOC1P02654 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOC1P02654 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.66□□□□□ -0.06
APOC1P02654 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOC1P02654 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOC1P02654 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOC1P02654 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOC1P02654 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.66□□□□□ -0.06
APOC1P02654 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
APOC1P02654 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
APOC1P02654 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
APOC1P02654 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
APOC1P02654 AC002310.6-201ENST00000624451 1377 ntBASIC14.66□□□□□ -0.06
APOC1P02654 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOC1P02654 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOC1P02654 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
APOC1P02654 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.66□□□□□ -0.06
APOC1P02654 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
APOC1P02654 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.66□□□□□ -0.06
APOC1P02654 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
APOC1P02654 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.66□□□□□ -0.06
APOC1P02654 AC136632.2-201ENST00000512891 861 ntBASIC14.66□□□□□ -0.06
APOC1P02654 AF238378.1-201ENST00000526806 358 ntBASIC14.66□□□□□ -0.06
APOC1P02654 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.66□□□□□ -0.06
APOC1P02654 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.66□□□□□ -0.06
APOC1P02654 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.66□□□□□ -0.06
APOC1P02654 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
APOC1P02654 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.66□□□□□ -0.06
APOC1P02654 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
APOC1P02654 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOC1P02654 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
APOC1P02654 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOC1P02654 AC131009.4-201ENST00000624048 1740 ntBASIC14.66□□□□□ -0.06
APOC1P02654 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOC1P02654 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
APOC1P02654 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.66□□□□□ -0.06
APOC1P02654 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
APOC1P02654 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.66□□□□□ -0.06
APOC1P02654 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOC1P02654 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.66□□□□□ -0.06
APOC1P02654 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOC1P02654 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
APOC1P02654 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOC1P02654 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOC1P02654 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.66□□□□□ -0.06
APOC1P02654 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.65□□□□□ -0.06
APOC1P02654 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOC1P02654 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
APOC1P02654 CYP2T1P-202ENST00000641596 2535 ntBASIC14.65□□□□□ -0.06
APOC1P02654 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
APOC1P02654 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOC1P02654 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.65□□□□□ -0.06
APOC1P02654 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.65□□□□□ -0.06
APOC1P02654 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.65□□□□□ -0.06
APOC1P02654 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOC1P02654 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.65□□□□□ -0.06
APOC1P02654 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOC1P02654 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.65□□□□□ -0.06
APOC1P02654 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOC1P02654 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOC1P02654 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOC1P02654 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APOC1P02654 AKR1C7P-201ENST00000305623 895 ntBASIC14.65□□□□□ -0.06
APOC1P02654 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.65□□□□□ -0.06
APOC1P02654 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.65□□□□□ -0.06
APOC1P02654 HCG4-201ENST00000418983 998 ntBASIC14.65□□□□□ -0.06
APOC1P02654 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.65□□□□□ -0.06
APOC1P02654 RPS15P9-201ENST00000494093 319 ntBASIC14.65□□□□□ -0.06
APOC1P02654 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOC1P02654 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.65□□□□□ -0.06
APOC1P02654 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
APOC1P02654 IFNL4P1-201ENST00000607083 540 ntBASIC14.65□□□□□ -0.06
APOC1P02654 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.65□□□□□ -0.06
APOC1P02654 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.65□□□□□ -0.06
APOC1P02654 REXO1L3P-201ENST00000622202 1288 ntBASIC14.65□□□□□ -0.06
APOC1P02654 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.65□□□□□ -0.06
APOC1P02654 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOC1P02654 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOC1P02654 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOC1P02654 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APOC1P02654 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOC1P02654 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
APOC1P02654 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.65□□□□□ -0.06
APOC1P02654 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.65□□□□□ -0.06
APOC1P02654 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.65□□□□□ -0.06
APOC1P02654 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.65□□□□□ -0.06
APOC1P02654 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.65□□□□□ -0.06
APOC1P02654 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
APOC1P02654 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.65□□□□□ -0.06
APOC1P02654 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.65□□□□□ -0.06
APOC1P02654 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APOC1P02654 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOC1P02654 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.65□□□□□ -0.06
APOC1P02654 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOC1P02654 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APOC1P02654 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms