Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC12.75□□□□□ -0.37
TRBV12-3P01733 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
TRBV12-3P01733 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
TRBV12-3P01733 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV12-3P01733 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
TRBV12-3P01733 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
TRBV12-3P01733 PKD1P5-201ENST00000532415 10291 ntBASIC12.75□□□□□ -0.37
TRBV12-3P01733 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV12-3P01733 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV12-3P01733 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV12-3P01733 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV12-3P01733 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV12-3P01733 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV12-3P01733 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
TRBV12-3P01733 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV12-3P01733 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV12-3P01733 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC12.75□□□□□ -0.37
TRBV12-3P01733 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
TRBV12-3P01733 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV12-3P01733 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV12-3P01733 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV12-3P01733 MIR1233-2-201ENST00000408138 82 ntBASIC12.75□□□□□ -0.37
TRBV12-3P01733 MIR1233-1-201ENST00000408722 82 ntBASIC12.75□□□□□ -0.37
TRBV12-3P01733 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
TRBV12-3P01733 ME2P1-201ENST00000426028 1970 ntBASIC12.75□□□□□ -0.37
TRBV12-3P01733 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.75□□□□□ -0.37
TRBV12-3P01733 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV12-3P01733 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV12-3P01733 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.75□□□□□ -0.37
TRBV12-3P01733 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
TRBV12-3P01733 YBX1P5-201ENST00000509441 847 ntBASIC12.75□□□□□ -0.37
TRBV12-3P01733 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC12.75□□□□□ -0.37
TRBV12-3P01733 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC12.75□□□□□ -0.37
TRBV12-3P01733 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
TRBV12-3P01733 AL138918.1-201ENST00000568306 659 ntBASIC12.75□□□□□ -0.37
TRBV12-3P01733 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV12-3P01733 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC12.75□□□□□ -0.37
TRBV12-3P01733 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV12-3P01733 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV12-3P01733 AC020765.3-201ENST00000613051 740 ntBASIC12.75□□□□□ -0.37
TRBV12-3P01733 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC12.75□□□□□ -0.37
TRBV12-3P01733 BSG-215ENST00000618006 1329 ntTSL 2 BASIC12.75□□□□□ -0.37
TRBV12-3P01733 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV12-3P01733 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
TRBV12-3P01733 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC12.75□□□□□ -0.37
TRBV12-3P01733 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
TRBV12-3P01733 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV12-3P01733 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV12-3P01733 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV12-3P01733 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV12-3P01733 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV12-3P01733 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
TRBV12-3P01733 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
TRBV12-3P01733 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
TRBV12-3P01733 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV12-3P01733 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC12.74□□□□□ -0.37
TRBV12-3P01733 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV12-3P01733 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV12-3P01733 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
TRBV12-3P01733 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
TRBV12-3P01733 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
TRBV12-3P01733 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV12-3P01733 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV12-3P01733 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC12.74□□□□□ -0.37
TRBV12-3P01733 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC12.74□□□□□ -0.37
TRBV12-3P01733 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC12.74□□□□□ -0.37
TRBV12-3P01733 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC12.74□□□□□ -0.37
TRBV12-3P01733 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC12.74□□□□□ -0.37
TRBV12-3P01733 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV12-3P01733 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV12-3P01733 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV12-3P01733 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV12-3P01733 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV12-3P01733 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV12-3P01733 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV12-3P01733 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
TRBV12-3P01733 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC12.74□□□□□ -0.37
TRBV12-3P01733 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.74□□□□□ -0.37
TRBV12-3P01733 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV12-3P01733 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
TRBV12-3P01733 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC12.74□□□□□ -0.37
TRBV12-3P01733 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC12.74□□□□□ -0.37
TRBV12-3P01733 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
TRBV12-3P01733 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.74□□□□□ -0.37
TRBV12-3P01733 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV12-3P01733 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV12-3P01733 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC12.74□□□□□ -0.37
TRBV12-3P01733 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
TRBV12-3P01733 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV12-3P01733 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV12-3P01733 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV12-3P01733 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV12-3P01733 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC12.74□□□□□ -0.37
TRBV12-3P01733 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV12-3P01733 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
TRBV12-3P01733 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV12-3P01733 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
TRBV12-3P01733 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV12-3P01733 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV12-3P01733 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms